Pseudomonas frederiksbergensis SI8, JZ00_RS10465 (fadH)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas frederiksbergensis strain SI8 contig00004, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGCCAACTTGCGCCGCAGGCGTCCAGGACTTTGGTAGTCGGTGGGAAAGAGCTCAGGCTGGATACCGAGCAAGTTGCCCCGATCGGCGGGCGTACCCTG GTCGACCGCCAGGTTGATGCGCAGGTCTGACAGGTAATGGCCGACTGGACGATCCGCCGTCCACAGCGCGTAAGTTATAACGGCAGCCATCAAGGCCAGT GAGAGGAGCAGGTACAGAAATTTGCGCATGGGGACAGTCAACGGCCGCTTACAGGTTCGTGATTTTTCATCAGGACACCGGGCAGGGTACGGTAAAACAA AGGATTAGCGAAAGGGCGGGTAGCCGTCTGTCGAGCAGTAGCGAATGATTGGCGTGCCGATTGTGTTGCGCATTTTGATCATTAACTTGTCCGTTTCGGT CATTGAGCGCTCCGGTTCCGACTCTTACGCTGTCACCCATGACTGATGGAGGCCACAGAGCTTCCACATTTTTCCGTGATCGCCCATTGTGGAGTTACCG
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| DNA Sequence for Gene |
>JZ00_RS10465
|fadH
ATGACCGCCCCTCATTACCCGCATTTGCTGGCCCCGCTGGACCTGGGCTTTACCACGCTGCGCAACCGTACCCTGATGGGGTCGATGCACACCGGCCTGG AAGAAAAGCCCGGTGGCTTCGAGCGCATGGCGGCCTATTTTGCCGAGCGCGCCCGGGGCGGCGTGGGCTTGATGGTAACCGGCGGGATCGGCCCTAACGA CGAGGGGGGCGTTTATTCCGGTGCGGCCAAGCTGACCACGGAGGAAGAAGCGCTCAAGCACCAAATCGTGACGCGCGCGGTGCATGAGGCGGGCGGCAAG ATCTGCATGCAGATTCTCCATGCCGGCCGCTATGCCTACAGCCCCAAGCAGGTGGCGCCGAGCGCGATCCAGGCGCCGATCAACCCGTTCAAGCCAAAAG AGCTTGACGAAGAGGGCATCGAAAAGCAGATCAGTGATTTTGTCACTTGTTCGGTACTGGCCCGGAAGGCTGAGTACGACGGTGTCGAGATCATGGGCTC GGAAGGCTATTTCATTAACCAGTTCCTGGCGGCCCACACCAACCATCGTACCGACCGCTGGGGCGGCAGCTACGAAAACCGCATGCGCCTGCCAGTGGAA ATCGTGCGTCGCGTACGCGAGGCGGTCGGCCCGAATTTCATCATCATTTTCCGGCTGTCGATGCTCGATCTCGTGGAGGGGGGCAGCACCTGGGAAGAGA TCGTCCAGTTGGCCAAGGCCATCGAGCAGGCCGGCGCGACAATCATCAACACGGGCATCGGTTGGCATGAAGCGCGTATTCCCACCATCGCCACCAAGGT GCCGAGGGCGGCGTTCAGTAAAGTCACCGCCAAGCTGCGTGGTTCGGTGAGCATTCCGCTGATCACCACCAACCGCATCAATACGCCCGAGGTCGCCGAG CAAATCCTGGCCGAGGGCGACGCCGACATGGTATCCATGGCACGGCCCTTCCTCGCGGACCCGGATTTCGTCAACAAGGCTGCCGCTGGCCGGGCGGACG AAATCAATACGTGCATCGGCTGCAACCAGGCCTGCCTGGACCATACGTTCGGCGGCAAGCTCACCAGTTGCCTGGTGAACCCGCGGGCGTGCCATGAGAC TGAACTCAACTACCTGCCCGTGACCCACGTGAAAAAAATCGCCGTGGTCGGCGCCGGCCCAGCCGGGTTGTCTGCCGCCACCGTAGCGGCGGAGCGCGGC CATCAGGTGACGCTGTTCGATTCGGCCAGTGAAATTGGCGGGCAGTTCAACGTTGCCAAGCGTGTGCCCGGCAAGGAAGAGTTCTTCGAAACACTGCGTT ATTTCAAGCGCAAGTTGCAGACCACCCACGTCGAGTTGTGTCTCGACACCCGGGTCGACGTGGCGCAACTGGTGGCTGGCGGTTTCGACGAGATCATCCT GGCCACCGGCATCGCGCCGCGTGTCCCGGCGATTCCAGGTGTGGAGCACCCGAAGGTGTTGAGCTACCTGGACGTGATTCTCGAGCGTAAACCGGTTGGC CGTAGCGTTGCGGTGATTGGGGCCGGAGGGATCGGCTTTGACGTGTCGGAGTTCCTCGTGCATCAGGGCGTTGCCACCAGCCAGGACCGCGAAGCGTTCT GGAAGGAGTGGGGTATCGATACGCACCTCCAGGCCCGCGGCGGCGTGGCCGGGATCAAGGCTCAACCCCATGCGCCGGCGCGGCAGGTGTTCCTGTTGCA GCGCAAGAAGTCCAAGGTCGGCGACGGCCTGGGCAAGACCACCGGTTGGATTCACCGCACGGGCCTGAAAAACAAGCAGGTGCAGATGCTCAACAGCGTC GAGTACCTGAAGATCGACGATCAGGGCCTGCACATTCGCATCGGCGAAACGGGCGAGCCGCAAGTGTTGGCGGTGGACAATGTGGTCATCTGCGCCGGCC AGGATCCGCTGCGCGAGTTGCAGGATGGCTTGGAAGCGGCTGGGCAAACGGTCCACCTCATCGGCGGTGCCGACGTGGCGGCGGAGCTGGATGCCAAGCG TGCGATCAACCAGGGTTCGCGGTTGGCGGCGCAGTTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCGCAATTGTGTAGACTCCCGGGATCCTCGGTGGGAGCGAGCCTGCTCGCGCCCACCGTTTCTTCGGATGCCAGGGAGTCCGCGACCAGCTGTTAACAT ATTGGCCTGTTTTCCACCCGGCCCGCAGCCATGCTTCTTCCCGCCCTAGACTGGCATCCCCAACCTCGCCTCGAACGCCTTCACTTGGACTGGCTCGCCC ACGCCAGCGTCGAAGTGGCGGTCTTGCGCCTGGACCGGATCGATCCGCTGATCAGCGGCAACAAATGGTTCAAGCTGCTTCACCACCTGCTCGCTGCCCA TCAGGCCGGTGCGGCAGGTGTGATGAGCCTGGGCGGCGCTTATTCCAATCATTTGCACGCGCTGGCCGCTGCGGGCAAGCGCTTCGGTTTTCCAACGGTG GGGTTGTTGCGGGGCCATCCTCGGGAAACGCCGACGGTACTGGACCTGAAAGCGTTCGGCATGACGCTGCACTGGTTGGGTTACGAAGGATACCGCAGGC
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| Amino Acid Sequence |
>2,4-dienoyl-CoA reductase
MTAPHYPHLLAPLDLGFTTLRNRTLMGSMHTGLEEKPGGFERMAAYFAERARGGVGLMVTGGIGPNDEGGVYSGAAKLTTEEEALKHQIVTRAVHEAGGK ICMQILHAGRYAYSPKQVAPSAIQAPINPFKPKELDEEGIEKQISDFVTCSVLARKAEYDGVEIMGSEGYFINQFLAAHTNHRTDRWGGSYENRMRLPVE IVRRVREAVGPNFIIIFRLSMLDLVEGGSTWEEIVQLAKAIEQAGATIINTGIGWHEARIPTIATKVPRAAFSKVTAKLRGSVSIPLITTNRINTPEVAE QILAEGDADMVSMARPFLADPDFVNKAAAGRADEINTCIGCNQACLDHTFGGKLTSCLVNPRACHETELNYLPVTHVKKIAVVGAGPAGLSAATVAAERG HQVTLFDSASEIGGQFNVAKRVPGKEEFFETLRYFKRKLQTTHVELCLDTRVDVAQLVAGGFDEIILATGIAPRVPAIPGVEHPKVLSYLDVILERKPVG RSVAVIGAGGIGFDVSEFLVHQGVATSQDREAFWKEWGIDTHLQARGGVAGIKAQPHAPARQVFLLQRKKSKVGDGLGKTTGWIHRTGLKNKQVQMLNSV EYLKIDDQGLHIRIGETGEPQVLAVDNVVICAGQDPLRELQDGLEAAGQTVHLIGGADVAAELDAKRAINQGSRLAAQL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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