Pseudomonas frederiksbergensis SI8, JZ00_RS09660

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas frederiksbergensis strain SI8 contig00004, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCCTGCTGTTCTGGCTGGTAGCAACGATGTCGTTGACGATCTATGAACAAGGCACCCGTCTGCCGGAGATCGACCTGCGCAACGCCGACGGCGAAACCG TGAACCTTGTCGATTACCAGGGCGGCCCGTTGGTCATCAATCTGTGGGCCACCTGGTGCCCCCCCTGCCGACGTGAAATGCCGGTGCTGGAGGAAGCTCA AAAACAGCGCCCGGACCTTACCTTCCTGTTCGTCAATCAAGCCGAAAGCATGCAAAGCGTCAGCACCTACCTCGCCACGCAGGGCTTGAGCCTCACCAAC GTGCTGTTCGACGGCAGCGGCCGCCTTGGCCAAGCCGTCGGCTCGATGGCGCTGCCAACGACGCTGTTCTACAGCGCCGATGGCCGCCTGCTGGGCAGTC ACCTGGGCGAATTATCTGAAGCGAGCCTGGCCCGGGCCCTGGAAAATTTCGATACGCCGGGTACCACTACGGCGGCCCACCCCGCGACAAGGAAACTGCC
DNA Sequence for Gene
>JZ00_RS09660
ATGCCCCGCCTCCACCACCTGCTGACCCTGGCCTTCGCCGGCGCGCTGTTGCAAGCACCGTTGCTCCAGGCCGAGGAGTTGCCCGCGGCCATCAAGAAAA TCGAAGCCAAGGGCGCCAAGATTGTCGGCACCTTCGAAGCACCGGACGGCTTGCGCGGTTACGCGGCGCAATACCAGAACCGTGGCATGGCGCTGTACCT GACGCCGGATGGCAAGCATGTGTTGCTGGGCAACCTGTATGACGCCGGCGGCAAGGACCTGAGCGCCGAACCGCTGCAAAAGCTGGTCTACGCGCCGATG GCCAAGGCAATCTGGGCGAAAATGGAGACCAGCAACTGGATCGCCGACGGCAACCGGGACGCCCCTCGCACGGTGTACCTGTTCAGCGACCCGAACTGCC CGTATTGCAACATGTTCTGGGAGCAAGCCCGCCCCTGGGTCAAGGCCGGCAAGGTGCAGTTGCGCCACATCATGGTGGGCATCATCCGTGAAGACAGCCC GGGCAAATCAGCCGCGCTGCTGGCCGCCAAGGAGCCGGAAAAAGCCCTGGCGGACCATGAGAAGGCCGGCAAGGGCAGCGCACTCAAGCCGCTCAAGGAG ATCCCTCCGGCCATCCAGGCAAAACTGGACGCCAACCAGCAACTGATGGATGAGCTGGAACTGTCCGCCACCCCGGCCATTTTCTACCTGGATGACCAGG GCGACCTGCAACAGCAGCAAGGCGCGCCGTCGCCGGACAAACTGGTGAAGATTCTCGGGCCGAAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCCGGGCAACGACCTGTGGGGAGGGAATTTAACCCCTCGCCACAGGTTTTCAGTGCCATTGTTTCAGGAACGCTGACAACGCCTGCGTCACGAACTCCGG ATTTTCCAGGTTGGAAATATGCCCAGCCTGCGGAATCAGCACGTGGTCACACCCGATCAGCTTGGCCATTTCCAAAGCCTCGGACGGTGGCCGAGGCTTG TCCTGGTCGCCACACATCACCAGCGTGCGCCTGGCATCCAGTCCAGGCAGCTGCGCCAAGATATCGTCCCGGCCAAAAATGATCCGCCCCAACGGCACGA TGCTGTCCTTCAGGCGGTCGGTCGGCATCGCGGCCAAGGTAGCGCGAAACTGCTGGTAGAGCGCCGACTGCGGGTCGATGCCCGGCCGGAAGAAAATCGG CACGATGATGTCCAGCAAAGGCTCGGGAATCGCGCCGCTGGCATCGATCTTGTCGAACAGCGAAAAGTAATACAGCCGGGTCGGCTCCGGCTCGACGCCG
Amino Acid Sequence
>dihydroneopterin aldolase
MPRLHHLLTLAFAGALLQAPLLQAEELPAAIKKIEAKGAKIVGTFEAPDGLRGYAAQYQNRGMALYLTPDGKHVLLGNLYDAGGKDLSAEPLQKLVYAPM AKAIWAKMETSNWIADGNRDAPRTVYLFSDPNCPYCNMFWEQARPWVKAGKVQLRHIMVGIIREDSPGKSAALLAAKEPEKALADHEKAGKGSALKPLKE IPPAIQAKLDANQQLMDELELSATPAIFYLDDQGDLQQQQGAPSPDKLVKILGPK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site