Pseudomonas frederiksbergensis SI8, JZ00_RS08610

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas frederiksbergensis strain SI8 contig00003, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGACTTCTCTGCCAACCCAGTTGAATTACAAACAGCCGAAGCAACTGGCGAACGTCGCAGCGCTGCCACTGTTCCCCGGCATCGGTGCCGAAATCATCGA CGGTCTGCTGGGCAGCGGCATCCAGGGCCTGGTGCTGGAGTGCTACGGCAGCGGTACCGGGCCGAGCGACAACCCGGCGTTCCTGGCCAGCCTGGAGCGG GCGCGGGACAGCGGTGTGGTGGTGGTCGCCGTCACCCAATGCCATGAAGGCGGCGTCGAGCTGGACGTGTACGAAGCCGGCAGCCGTTTGCGCGGCGCTG GCGTGTTGTCGGGCGGCGGCATGACCCGCGAGGCAGCGTTTGGCAAGTTGCAGGCGTTGATTGGCGCTGGATTGCCGGTGGATGAGGTTCGGCGGTTGGT TGAGCTGGATCTGTGTGGCGAGCTGATCTGACGGCCTGCAAAGTTTTTGGCCGGCATATAACTTGCTCCGTCTCCAGCCTCCCAAGGCTGGAAACGGACC
DNA Sequence for Gene
>JZ00_RS08610
ATGCTGCATTCCCACCTCACGACACTCAACGCCGTCTCCCTGGTGCTCGACGCCTTCAAGCATGACGGCCTGCCACACGATGCATTGCTGGCCGGCAGCG GCATCAGCACGGCGGACTTGAGCCGGGCCGACACGCGCATCACCACCAACCAGGAGATGCAGGTCTGTGCCAACGCCGTCGCGCTCAAGCGGGATATCGG CTTGGAACTGGGCCGCAACATGCACGTTTCGTCCTACGGCATGCTGGGATACGCCCTGCTCACGAGTGCCACCTTAGGTGACGCTTTGCGTCTCGCGCTG CGCTACCCGGCGCTGTTGGGAACACTCTTCGAGCTGGCCCTGGAAGAGGACGGCGAGCACATCTGGCTCAGCGCTGGCGACTATCGGGAAAACCCGGCCC TGGCGGCGTTCAACGCCGAGTTCTGCATGGTCTCGCTGAAGGTAATCTGCAACGATTTGCTCGGTCACCCGCTGCCCTTGCGCGCAGCGCGGTTCGAACA CCCAGCGCCGGATTACCACGCGCGCTACGCCAATCTCTTCGACTGCCCGGTCCGCTTCGATAGCATCGACAACGCCTTTGCCTTCGATCGCCATTGGCTG GAACAGCCCCTGCCGCTGGCCGACCCCATCACTCATCACGCCATGGCCGAACGCTGCCGCCGGCAGAACACCGAATTCACCGGCCGCCAGGCCTGGCTGG GACGCATCCGCCAACTGCTCGTCGCGCAACTCGATGCCGCCCCAGGCCTGGAGGGCTTGGCCGAACAAATGAACTGCTCGGCGCGCACCCTGCGCCGGCA CCTCAAGGATCTGGGTTGCAGCTATCAGGAACTGCTCGATGAGCTGCGCTTCGAACGGGCCAAGCAGATGCTCTGTGAAGACCGACTGCCGATCTACCAG ATCGCCGAACTGCTCGGTTTCAGTGAAACCGCGAGCTTTCGCCATGCCTTCGTACGCTGGAGCGGCGTGGCGCCGAGTCGGTTCAGGACGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AAGTTGGCTTCAAACACGATCCCCGTGGCGAGGGAGCCATAGACTCACGCCCCGAACCAGCGCACACCCGCGCCAACAAGGGGCGATTTACGGTCAAACC TTTTGGCCATTTCGATCCCCTTTTGGCCTTTCCTGCCGTTCTCCTAAACCCTGCGTGGCGCAAGACTTGATCCAGCGAATCAGCCCTGCGGAGAACAAGA ATGCTGACGATCTACTCAGACGATCACCACCTGCACCATGGACGCTGCGAATTGATGGACGGGCAGTTGATGCCCTGTTTCGAGATGCCGTCCCGGGCCG ACCATGTGCTGGAGCGGGTCAAGGCTCGGGCGCTGGGGCCGGTGGAGGCGCCGCAGGATTTTGGCCTGGCGCCGATCCTGCGTATCCACAGCCCGGCGTA TCTGGAATTCTTCAAGGGCGCCTGGGAGCGTTGGACCGAGTTCAACCGCGACGGTGACCTGCTGCCCTACACCTGGCCGGCCCGCACGTTGCGCACGGTG
Amino Acid Sequence
>AraC family transcriptional regulator
MLHSHLTTLNAVSLVLDAFKHDGLPHDALLAGSGISTADLSRADTRITTNQEMQVCANAVALKRDIGLELGRNMHVSSYGMLGYALLTSATLGDALRLAL RYPALLGTLFELALEEDGEHIWLSAGDYRENPALAAFNAEFCMVSLKVICNDLLGHPLPLRAARFEHPAPDYHARYANLFDCPVRFDSIDNAFAFDRHWL EQPLPLADPITHHAMAERCRRQNTEFTGRQAWLGRIRQLLVAQLDAAPGLEGLAEQMNCSARTLRRHLKDLGCSYQELLDELRFERAKQMLCEDRLPIYQ IAELLGFSETASFRHAFVRWSGVAPSRFRT
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site