Pseudomonas fluorescens AU20219, AA067_RS29790
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU20219 Contig_90, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCCTGGGTTAAAACAGCACTTCCCAAAACCGCTGCAAGCGCTTTACATTGGCACTTGCAGCGCGTTGAAGAGCTTGGTTAAAAAATCAGCGCTTCCCTTA ACGCTGGTGATTTTTTAAACTGTTGAGTCCGCTCGCCCATCCGGGCAGCGCGCATATTGCATTTGCTACGAGGAAGACCATGGCCCGCGTAACCGTTGAA GACTGCCTAGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCTACCAAGCGTGCCCGTCAACTGGCCACCGGCGGCAAAGAGCCGAAAGTAGCAT GGGAAAACGACAAGCCAACCGTCGTCGCCCTGCGCGAAATCGCTGAAGGCCTGATCGACTACGCAGCCATCGCCGAAGCCGAAATCGTTGAAGATGAGCC GCTTTTCGCTGCTTTCGAGGACGAGTCCAACGAGGCCGTCTGAGCCTATGCCTGGTCGACGTAGCACGGCGCGGGATCACAGCTTACGGCAGGAGACATC
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| DNA Sequence for Gene |
>AA067_RS29790
ATGCCGAGCATAGACGCCCTCGCCGATCGCTTATCGACCTATCTCGGCACGGACCAGGTCAATCTGGTCCGCCGAGCGTATTTCTACGCCGAACAAGCCC ATGACGGTCAACGCCGTCGCAGCGGCGAGGCGTACGTCACGCACCCACTCGCGGTAGCGAACATTCTTGCCGACATGCACATGGACCATCAGAGCCTGAT GGCCGCGATGCTGCATGACGTCATCGAAGACACCGGCATCGCCAAGGAAGCGCTCAGCGCGCAGTTTGGCGAAACCGTGGCCGAATTGGTGGATGGGGTC AGCAAACTGACCCAGATGAACTTCGAAACCAAGGCCGAAGCCCAAGCGGAAAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGACATTCGCGTGATCC TGGTCAAGCTGGCCGACCGCCTGCACAACATGCGCACCCTGGAAGTCCTTTCCGGCGAGAAACGTCGGCGGATCGCCAAGGAAACCCTGGAGATCTACGC CCCCATCGCCAACCGCCTGGGCATGCATGCCATCCGCATCGAATTCGAAGACCTGGGCTTCAAGGCGATGCACCCGATGCGTTCCGCGCGGATCTACCAG GCGGTCAAGCGCGCCCGGGGCAACCGCAAGGAAATCGTCAACAAGATCGAGGAATCCCTCAGCCACTGCCTGGCCATCGACGGCATCCAGGGCGAGGTCA GCGGTCGCCAGAAGCACCTGTACGGCATCTACAAGAAGATGCGCGGCAAGCGTCGGGCCTTCAACGAGATCATGGACGTCTATGCGTTCCGCATCATCGT CGACAAGGTAGACACCTGCTATCGCGTACTCGGCGCTGTACATAATTTGTACAAGCCACTGCCGGGACGCTTCAAGGACTACATCGCCATTCCCAAGGCC AACGGCTATCAGTCGCTGCATACCACGCTGTTCGGCATGCACGGAGTGCCCATCGAGATCCAGATTCGCACCCGGGAAATGGAAGAAATGGCCAATAACG GCATCGCCGCCCACTGGCTGTACAAATCCAGTGGCGACGAACAGCCCAAAGGCACTCACGCCCGCGCCCGCCAATGGGTCAAGGGCGTGCTGGAAATGCA GCAACGCGCCGGCAACTCCCTGGAATTCATCGAGAGCGTGAAGATCGACCTGTTCCCGGACGAGGTCTACGTGTTCACGCCCAAAGGCCGGATCATGGAG CTACCCAAAGGCTCCACCGCGGTGGACTTCGCCTACGCGGTTCACACCGACGTCGGCAACAGCTGCATCGCCTGCCGGATCAATCGTCGCCTGGCGCCGC TGTCCGAACCCCTGCAAAGCGGTTCCACAGTGGAAATCGTCAGCGCCCCGGGCGCGCGCCCGAACCCGGCCTGGCTGAATTTCGTGGTCACCGGCAAGGC CCGCACCCATATCCGCCATGCTCTCAAGCTGCAGCGCCGCTCCGAGTCCATCAGCCTCGGCGAACGCTTGCTGAACAAGGTGCTCAACGGCTTCGACAGC TCCCTGGAAAAGGTCCCGGCCGAACGCATCCAGGCGATTCTCCAGGAATACCGCCTGGAACTGATCGAAGACCTGCTGGAAGACATCGGCCTGGGCAACC GCATGGCCTACGTTGTGGCGCGCCGCCTGCTGGGCGAAGGCGAACAGCTGCCAAGCCCGGAAGGCCCGCTGGCAATCCGCGGCACCGAAGGCCTGGTGCT GAGCTACGCCAAGTGCTGCACGCCGATCCCGGGCGACCCGATCGTCGGCCACCTGTCCGCCGGCAAGGGGATGGTGGTGCACCTGGACAACTGCCGCAAC ATCAGCGAAATCCGCCACAACCCGGAAAAGTGCATCCAGCTCTCCTGGGCCAAGGATGTCACCGGCGAATTCAACGTCGAGCTGCGCGTCGAACTGGAAC ACCAACGAGGCCTGATCGCGCTGCTGGCCAGCAGCGTCAACGCCGCCGACGGCAACATCGAGAAAATCAGCATGGACGAACGCGATGGTCGCATCAGCGT GGTCCAACTGGTGGTCAGCGTGCACGACCGCGTACACCTGGCCCGCGTGATCAAGAAACTGCGCGCCCTGACCGGGGTCATCCGCATCACCCGCATGCGT GCGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCGTCCATTACAAGGAGTCATTCATGACCAAGACTGTTATCACCAGCGACAAGGCACCTGCTGCCATCGGCACCTACTCCCAGGCGATCAAGGCTGGCA ACACCGTCTACATGTCCGGCCAGATCCCTCTGGATCCCAAGACCATGGAGCTGGTGGAAGGCTTCGAAGCCCAGACCGTCCAGGTGTTCGAGAACCTCAA GTCGGTAGCCGAGGCCGCTGGCGGTTCGTTCAAGGACATCGTCAAGCTGAATATCTTCCTCACCGACCTGAGCCACTTCGCCAAGGTCAACGAGATCATG GGCAAGTATTTCCAACAGCCTTACCCAGCCCGCGCCGCCATCGGCGTGGCCGCCCTGCCAAAGGGTGCACAGGTTGAAATGGATGCCATTCTGGTCATCG AGTAACACCTGCGGCGCAGCCCTCAAGGCTGCGCCGTTTTCGTTCTGAAAGGATTTCGTCATGCGCCAAGCGCTAGCTGTTTCGCTGCTCGCCGTACTGC
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| Amino Acid Sequence |
>bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
MPSIDALADRLSTYLGTDQVNLVRRAYFYAEQAHDGQRRRSGEAYVTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALSAQFGETVAELVDGV SKLTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKETLEIYAPIANRLGMHAIRIEFEDLGFKAMHPMRSARIYQ AVKRARGNRKEIVNKIEESLSHCLAIDGIQGEVSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIVDKVDTCYRVLGAVHNLYKPLPGRFKDYIAIPKA NGYQSLHTTLFGMHGVPIEIQIRTREMEEMANNGIAAHWLYKSSGDEQPKGTHARARQWVKGVLEMQQRAGNSLEFIESVKIDLFPDEVYVFTPKGRIME LPKGSTAVDFAYAVHTDVGNSCIACRINRRLAPLSEPLQSGSTVEIVSAPGARPNPAWLNFVVTGKARTHIRHALKLQRRSESISLGERLLNKVLNGFDS SLEKVPAERIQAILQEYRLELIEDLLEDIGLGNRMAYVVARRLLGEGEQLPSPEGPLAIRGTEGLVLSYAKCCTPIPGDPIVGHLSAGKGMVVHLDNCRN ISEIRHNPEKCIQLSWAKDVTGEFNVELRVELEHQRGLIALLASSVNAADGNIEKISMDERDGRISVVQLVVSVHDRVHLARVIKKLRALTGVIRITRMR A
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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