Pseudomonas fluorescens AU20219, AA067_RS19370

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU20219 Contig_88, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACAAGACCATTGCGGTCAATATGGGCGAAGTGTCGATCAAAGATATGGGCACTGCCAGCGCGCCTAAAGGCAACGGCACACTGAACGTCGAAAACTTCAA CATGAACATCAACTGCAACGCCGGCACCAAGGTTGCGATGATCTTCGAGCCGACCAAAGGCGCAGGTTCGGGTCTTGAACCCGGCACCAAAGTGCTGCGC CTGATCGATGGCCTGGGGACTGCGAAAGGTATCGGCATTGCACTGCTTGATTCCAATGGCGCCGTGATCGACCTCAGCTCGCCGAGCACCGCAAAGATCG AAAACACTCTGCAGGACAGTAACACCACCCTCAAATTCTCGGCAGCCTACGTAACCACCGTAGACCCGAAACTGGCTGTTGCCGGTCGCGGCGACGCCAC CCTGCCGTTCACGCTGCAATACGAATAATCCGCGCGAGCACACAAGCCTGGTGCGGGGCCGCTCGGCCCTGCATCCTCATTCACTTGCGCGGTAGCCCTC
DNA Sequence for Gene
>AA067_RS19370
ATGTTTTATCGTCACTCACTGTCCTTTTGTGCAGGCCTGCTTGGCCTGCTCGCGGTCAATCAGGCCGTGGCCGGAATTTCCTTGAGCAGCACCCGTCTGA TTTTCGACGGCCAGCACAAGGAGGCCGGAATCACCGTGCGTAACAGCGGTGAAGATGTGTTGATCCAGTCCTGGATCGACGCCGACTCCAGCGAAACCGC AGCAGTCCCCTTTGCCGTGACGCCACCCCTGGTGCGCGTCAGCGGTGACGAACAGCAAATACTGCGGGTGATCTACGAAGGCGCAGGCATGCCAAGCGAC CGCGAGTCGGTGGTGTGGCTCAATGTGCAAGAGATCCCTAAAGCGGCGAAATCCGCCAACACCTTGCAACTGGCCGTGCGCCAGCGCATCAAGGTGTTCT TTCGCCCGGCAGGCCTGAAAAACAACGCCTATCTGGCACCGAGCGAACTGACCTGGCGCCTGACAGAGCGAGCCGGCAAGAGCTTGTTGGTGGTGAACAA CCCAAGCCAGTATCACGTGTCGATTGCCGATATCACCCTGCAATCCGGCGCCGTCAATGAACATCCCTTTGATTCGATGATGATTGCCCCAGGCGAACAA AAAGACTTCAGCCTCAAGCAACTTCACAACGCCAATACAGCCCATCTTTCATTCAGAAGCATTAATGACTATGGCGCACAAGATAGTTATAGCGCGCAAC TTTCCAACAGCGCTGACACCCGAGCCAGTTTGAATAAAGAAACCCCCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTTACATGCCGCAGTGACGGTTGAACTTCCACTGTATTTCTCTTCGCTCCGTTAGTTCGTATCGGAGGTGATATGGGGTTCCTGCATGTTTTTACTCAAG CGCGACGGATGGGCGCCATTTTCGATTGCCCTGTTGTTCAGCACCACCTGCGCGGCCGAGGGTGATGAACAGTTCAATACCTCTTTTCTGCAAGGCGCAC CGTCCGCTGTCGATCTGCAATCATTGCTCGCCAGCAGTCGCGTGCTGCCCGGGGTCTACCGTATGGATCTGTACGGCAACGAAACGCTGGTTGGCCGCCG CGACATCGATTTTCGTCGCCCTTCCGGCACGAGCAAGGTCGAGGCCTGCCTGACTCTGGAGATGGTGCAGCAATTGGGGGTCGACATCGGCAAGCTGCAA GCCAGCGGCAAACTGAGCAGCGATGATCCCGATGCCTGCCTCGACCTGCCCGCCTTGATTGATCATGCCAGCGTGCGCTACGACATGCCCCGTCTGCGCT
Amino Acid Sequence
>pilus assembly protein
MFYRHSLSFCAGLLGLLAVNQAVAGISLSSTRLIFDGQHKEAGITVRNSGEDVLIQSWIDADSSETAAVPFAVTPPLVRVSGDEQQILRVIYEGAGMPSD RESVVWLNVQEIPKAAKSANTLQLAVRQRIKVFFRPAGLKNNAYLAPSELTWRLTERAGKSLLVVNNPSQYHVSIADITLQSGAVNEHPFDSMMIAPGEQ KDFSLKQLHNANTAHLSFRSINDYGAQDSYSAQLSNSADTRASLNKETP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site