Strain | Pseudomonas fluorescens strain AU20219 Contig_87, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGGCATGATCGACGTGAGCGCAGCGCCGACCCTGGTGGTCGGCCTGGGCTGCCAGAAAGGCTGCCCGGTGACCACGCTGCGCGCCTTGCTCGACCAGGTC CTGGCGGCGCACCAGTGGCAGGCCCGGCAGGTCCTGGCCCTGGCCAGCATCGACCTCAAGCGCAACGAACCCGGCCTGCTGCAACTGGCGGAGCAACTGG AACTGCCGCTGACCTGTTTCAGCAGCGGCCAGCTCGCCCCCTTTGCCCTGCGCCTGAGCCATCGCTCGCACATCGCCTTCGAACGCACCGGCTGCTACGG CGTGGCCGAAAGTGCCGCCCTGGCCCTGGCCGAACAGCTGTCACCCGGCCCGGCCACACTGCTGGTCCCCCGGCAAAAATACGCCCAGGCCACCCTGGCA TTGGTCGCCACCCGGTAGAATCCCCGATAATTCCCGCCTTCGATCATGAGCAATCTTCATCTGAAGCACGGCTCCCGACCTTTTTTCACAGGACACAGCC
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DNA Sequence for Gene |
>AA067_RS18345
ATGACTGTCTATTTCATCGGCGCCGGCCCCGGCGACCCGGAACTGATCACCGTCAAGGGCCAGCGCCTGATCCATCGTTGCCCGGTGATCATCTACGCCG GCTCCCTGGTGCCCGAGGCCGTCCTTGAAGGTCACAGCGCGGAGCGGGTGATCAACAGCGCCGAGCTGCACCTGGAACAGATCATCGAGGCCATCAAACA AGCGCATGAACAGGGCCAGGATGTAGCCCGGGTGCATTCCGGCGACCCGAGCCTGTATGGGGCCATCGGCGAACAGATTCGCTGCCTGCGGGAGCTGGGC ATCCCCTTCGAGATCATCCCCGGGGTCACCGCCACCGCCGCCTGCGCTGCCCTGCTGGGGGCCGAACTGACCCTGCCGGACGTGTCCCAGAGCGTGATCC TGACCCGCTACGCGGACAAGACCGCGATGCCTGCCGGCGAGGATTTCGCCAGCCTGGCGGCCCACGGCGCCACCATGGCCATTCACCTGGGGGTCAATCA CCTGCCGAAGATCGTTGCCGAGTTGCTGCCCCACTACGGCGCAGACTGCCCGATTGCCGTGGTGCACCGCGCCACCTGGCCGGATCAGGACTGGGCCCAG GGCACCCTGGCGGACATCGTCGAGCAGGTGGCGGCCAAGGGCTTCCGGCGCACGGCCCTGATTCTGGTGGGCCGGGTGCTGGCCACGGATGCATTCAGCG AATCGTCGCTGTACCGCGCCGGGCACGCACACCTCTACCGCCCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCCCCTTTTGCGGGAACTGGCTGGCCAGCGAAGGCGATCTGGGCATTGGTGCAAGGCTTGAGGGCCCTTTCGCCGGCAAGCCGGCTCCTACGGAGGCTTT TGGGGGGCGCTGGCTTGGGGGTATAAAAAAACGGCGCTCACGGGGCGCCGTTTTTTTGTTTGCAGCGAACGCCTTAGTAGTAGGCGTTTTCTTTCTGCGT GTGGTCGGTGACGTCACGCACGCCCTTGAGCTCGGGGATGCGCTCGAGCAGGGTGCGCTCGATGCCTTCCTTCAAGGTCACGTCGGCCTGACCGCAGCCC TGGCAACCGCCGCCGAACTGCAACACGGCAATGCCGTCCTCGACCACGTCGATCAGGCTGACCTGGCCGCCGTGGCTGGCCAGCCCCGGGTTAATCTCGG TTTGCAGGTAGTAGTTGATGCGCTCGTTGACCGGGCTGTCGGCATTGACCATCGGCACCTTGGCGTTGGGCGCCTTGATGGTCAGCTGGCCGCCCATGCG
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Amino Acid Sequence |
>precorrin-4 C11-methyltransferase
MTVYFIGAGPGDPELITVKGQRLIHRCPVIIYAGSLVPEAVLEGHSAERVINSAELHLEQIIEAIKQAHEQGQDVARVHSGDPSLYGAIGEQIRCLRELG IPFEIIPGVTATAACAALLGAELTLPDVSQSVILTRYADKTAMPAGEDFASLAAHGATMAIHLGVNHLPKIVAELLPHYGADCPIAVVHRATWPDQDWAQ GTLADIVEQVAAKGFRRTALILVGRVLATDAFSESSLYRAGHAHLYRP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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