Strain | Pseudomonas fluorescens strain AU20219 Contig_86, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCTGCTGGACAAGGACGCCTGCCGGCTGGAGATCGACCTTGCCGGCCAGCGTCACCCTTGCGCCCTGCCGCACACCGATCGCCTGGACCCGGCAGCCCTG CCCGCCCCCCATTCCCTGCCCGCCCCCCGCGGCCGCGCCGATGCCAGCGTGGCGCTGGTGAAGCTGGCGGTGGCACGCTCCGGCGACAAGGGCAACCACA GCAATATCGGGGTCATGGCGCGCCACCCCGACTACTTGCCGTGGATTGCCGAAGCCCTGACTCCCGAGGTGCTGGTGGACTGGATGGGCCATGTGCTGGA CCCGGTGCATGGCCGGGTCCAGCGCTGGTACCTGCCGGGCACCCATAGCCTCAACTTCCTGCTGGAGAACGCCCTGGGCGGCGGCGGCGTCGCCAGCCTG CGCATCGACCCGCAAGGCAAGGCCTTTGCCCAGCAGTTGCTGGAAATCCAGATCCCGGTGCCGCAGAGCATCGCCGACGCCGTCAATTAAAGGAGCTGCC
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DNA Sequence for Gene |
>AA067_RS20955
GTGGTGTACGACTCGATTTTCAAAGCGCAATTGTTCGCCGGCCAGACCATCATCGTCACCGGCGGCGGCAGCGGGATCGGCCGCTGCACTGCCCACGAAC TGGCGGCCCTGGGGGCCCAGGTGCTGCTGGTGGGGCGCAAGGCGGAAAAACTGCAGAAGGTCGCCGGCGAAATTGCCGAGGACGGCGGCAAGGCCGACTG GCAGGCCTGCGACATCCGCGACGAGGAAGCGGTCAAGGCCCTGGTGGGCCGGCTGATGGAGCGCTTTGGCCCGATCCATGGCCTGGTGAACAATGCCGGC GGCCAGTACCCGGCGCCCCTGGCCTCGATCAACCAGAAGGGGTTCGAAACCGTGCTGCGCACCAATCTGGTGGGCGGCTTCCTCATGGCCCGGGAAGTGT TCAACCAGTCCATGAGCCGCCACGGCGGCAGCATCGTCAACATGCTCGCCGACATGTGGGGCGGCATGCCCGGCATGGGCCACTCCGGCGCGGCGCGCTC GGGGATGGACAATTTCACCAAGACCGCCGCCTACGAATGGGGGCATGCCGGGGTGCGGGTCAACGCGGTGGCGCCGGGCTGGATCGCCTCCAGCGGCATG GACACTTATGAAGGCGCGTTCAAGGCGGTGATCCCCACCCTGCGCGAGCACGTACCGCTCAAGCGCATTGGCACGGAATCGGAAGTCAGCGCGGCCATTG TCTTTCTGCTCAGCCCCGGCGCGGCCTTTATCAGCGGCAGCACCCTGCGCATCGATGGCGCGGCCAGCCTCGGCAGCCGGGCCTGGCCATTGAGCAAGGC GCGCAACAGCGAGTCCTACAACGGTTTCCATCGCGCCTACCTGCCCGACGTACTCAAGGGCGAGGAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCATGCCGGTGATCCAGTCCCAACTCGACCCCCATGGCCCGCAGTTCGCGCAAAACCGCGCAGCCATGCTGGCGGGCCTGCAACAGTTGCAGGAACTGC AGCAGAACCTGCTGGCCAAGGCCGCCGAAGCCAAGGCCAAGTTCGACCAGCGCGGCCAACTGCTGCCCCGCGAACGCCTCAACCTGCTGCTGGACCCGGG GGCGCCGTTTCTTGAGCTGGCCAGCCTGGCCGGCTACAAGCTGCACGACGACAAGGACGGTACCCAGGCCGGTGGCGGCCTGATTGCCGGCATCGGCTAT GTGTGCGGCGTGCGCATGCTGGTGGTGGCCAACAACTGCGCGATCAAGGGCGGGACCATCTCCCCCAGCGGCCTGAAGAAATCCCTGCGCCTGCAACAGA TCGCCATGGAGAACAAACTGCCGGTGGTGACCCTGGCACAAAGCGGTGGCGCCAACCTCAACTACGCCGCGGAAGTCTTCGTCGAAGGTGCACGCAGCTT
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Amino Acid Sequence |
>2,4-dienoyl-CoA reductase
MVYDSIFKAQLFAGQTIIVTGGGSGIGRCTAHELAALGAQVLLVGRKAEKLQKVAGEIAEDGGKADWQACDIRDEEAVKALVGRLMERFGPIHGLVNNAG GQYPAPLASINQKGFETVLRTNLVGGFLMAREVFNQSMSRHGGSIVNMLADMWGGMPGMGHSGAARSGMDNFTKTAAYEWGHAGVRVNAVAPGWIASSGM DTYEGAFKAVIPTLREHVPLKRIGTESEVSAAIVFLLSPGAAFISGSTLRIDGAASLGSRAWPLSKARNSESYNGFHRAYLPDVLKGEE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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