Pseudomonas fluorescens AU20219, AA067_RS23455

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU20219 Contig_80, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCACGCCGCCGATCTGGCTCGACGAATTGGCGGCCAGCGGCATTCCCCATGAATGGAGCACCCAGATCCTCACCCGGCTCTGGCGCAAGCTGGCACTCAA CTGCGCGATCAACCCACTGACGGTACTGCACGACTGCCGCAACGGTGGCTTGCAGCAGCATCAGTGCGAAGTGGCCACCCTGTGCGCCGAGCTGAGCGAG CTGCTGCAATGCTGCGGGCAGCCCGCCGCAGCGGAAAACCTGCAACAGGAAGTGGAACGGGTGATCCTGGCCACCGCCGCCAACTATTCCTCAATGCACC AGGATGTCAGCAACGGACGGCGCACCGAAATCAGCTACCTGCTGGGTTACGCCTGTGAAGCCGCTGCCCGGCATCGCCTGCAACTGCCCCATCTGCAGCA GTTGCAACAGCGCCTGGTGAACCAGCTGCAGCAACGCGGATTGCCCAGCGCCTGAGCAGCGGCTACGCTCCCCACTTGCTCATTTCCAGCGATATAGCCG
DNA Sequence for Gene
>AA067_RS23455
ATGCCATTGCGCCAGCGCCTCGAAAACCTGCCAGTGGGCCAAAAGCTCCTGGCCGCCCTGCTTGTCCTGCTGACCACCGTTCTGCTGGTCGCCAACCTGA CCTTTATCAGCGCGGCCTACTGGATCTCCCAGGAAAGCATGGCGCCCCAGGCGCTGCAGACCATTGGCCGCCTGGTGTCCAATCCGACCCTGGCGATCCA GGCACTGAACTCCCCCGAAGATGCCGAGAAGCTGCTCAACGAACTCGACAGCTATAGCCCGCTGCGGGCTGCCGCACTCTATGACGGCAAGGGCCAGCGC CTGGCCCAGTTGCAGCACGGCGAACGCCTCAAGCTGCCCGAACGCTACCGGCATATCGAAGCCTGGCAAATGACCGAGTTTCGCAGCAACCAGGTCATCA CCCTGCCTCGCCCGGGCCAGGCCCCCGGCCACCTGCTGTTGGTGGCCACCAGCGAACTGCCGATGGCCTTCTACACCGGCACCCTGACCGCCAGCCTGGG AATCCTGATCTTCAGTGTGCTGCTATGGCTGGTCATCGCCCGGCAGATCAAGCGCCTGATCACCCAGCCGATCCACCAGCTCGAGGAACTGTCGCGCCAG GTCACCCGCGAGGAGAACTATGCCCTGCGCGCAGCCCGGGGCAACCACGATGAAATCGGCAGCCTGGCAGAAGCCTTCAACACCATGCTGTCGCGTATCG AAGCTCGCGAGCAGCAGCTCAAGCGCGCCCGGGACGACTCCCAGGCCGCCTACGACCAGGCCCAGGGGCTGGCGGAGGAAACCCGCCATACCAACCGCAA GCTGGAACTGGAAGTCCAGGTGCGTAGCAAGATCGAGAAGAAGCTCACCGGCTTTCAGAACTACCTCAACAGCATCATCGACTCCATGCCCTCGGCGCTG ATCGCGCTGGATGAACAGCTCTACGTCACCCAGTGGAACCAGGAAGCCAGCGCCCTGTCCGGCACCCGGCTCGACGAAGCCCTGAACCAGCCGATCTTCC TCGCCTTCGAACCGCTCAAGCCATTCCTGCCGCAACTCAAGGAAACCGTCGAACAGCACACGGTGACCAAGGTCGAGCGTGTCACCTGGTTCAAGGACGA AGAGCCCAAGCACTACGCCCTGACCTTCTACCCCCTGATGGGGGGCGCCGGACGCGGGGTGGTGATCCGTATCGACGACATCACCCAGCGCCTGTCCCTG GAAGAGATGATGGTGCAATCGGAGAAAATGCTTTCGGTCGGTGGCCTCGCGGCCGGCATGGCCCATGAGATCAACAACCCGCTGGGAGCGATCCTGCACA ACGTACAGAACATTCGCCGACGACTGTCTGCCGATCTGCCAAAGAACCTTGAGCACGCGCAGCAGATCGGTGTTGAACTGCAGACCGTCAATCGCTACCT GGAAAGCCGCGAAGTACCGCAACTGCTCGATGGCATTCAGCAGGCCGGAGCCCGGGCGGCGAAGATCGTCACCCACATGCTCAGCTTCAGCCGGCGCAGC AACCGGCAGATGGCCCCCTGCGACCTGCCGGCGCTGATCGACCAGGCGGTGGAGATCGCCAGCAACGACTTCGACCTGGCCATTGGCTTCGACTTCAAGG GCCAGGCGATCATTCGCCAGTTCGACCCGAACCTGGGCCCGGTTCCCGGCACTGCCAACGAACTGGAACAGGTGCTGCTCAACCTGCTGAAAAACGCTGC CCAGGCCATCCATCAGCGCGAAGATGACAGCGAACCCGGACGTATCATCCTGCGTACCCGTTTGAATCCGCCCTGGGCAGAGATCCAGGTGGAGGACAAC GGAATCGGCATGAGCGAAAACGTACGCAAGCGTACCTTCGAGCCCTTCTTCACCACCAAGGAAATCGGCCAGGGCACCGGGCTCGGCCTGTCGGTGTCGT ACTTCATCATCACCAATAACCACAAGGGGCAGATGGAGGTGCAGTCCACCCGCGGCCAGGGCACTTGCTTCACCTTGCGCCTGCCCCTGGCCAGCAGCCA GCCGCTGGTCCAAGAACCGTTACCACTGGAGAACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACATGGGCTTTCGCTTGTCGAAGATCTACACCCGCACTGGCGACAAAGGCGAAACCGGACTGGGGGATGGCCGTCGGGTGCCCAAGGATCACCCACGGGT CGAAGCCATTGGCGAGGTTGATACCCTGAACAGCCAATTGGGCCTGCTACTGGCAGGCCTCGGTGAGCAGAGCGGTGCCTGCCCCGGGCTCGAGGAAGTG ATCACAGTGCTGGCGCCCTGTCAGCATCGGCTGTTCGATTTGGGTGGCGAGCTGGCGATGCCGGTCTATCAGGCCCTCAACGAGACCGAAGTAGAGCGCC TGGAGGCGGCCATCGATCTGTGGAACGAGGAGTTGGGCCCGCTGGAGAACTTCATCCTGCCCGGCGGCTCGGCGCTGATCGCCCAGGCCCATGTCTGCCG CAGCCTGGCGCGCAGCGCCGAGCGTCGCTGTCAGCACCTGAATGCCGTGGAGCCTTTGCAAGGGGTTGGGCTGGCCTACATCAATCGCCTGTCGGACCTG
Amino Acid Sequence
>histidine kinase
MPLRQRLENLPVGQKLLAALLVLLTTVLLVANLTFISAAYWISQESMAPQALQTIGRLVSNPTLAIQALNSPEDAEKLLNELDSYSPLRAAALYDGKGQR LAQLQHGERLKLPERYRHIEAWQMTEFRSNQVITLPRPGQAPGHLLLVATSELPMAFYTGTLTASLGILIFSVLLWLVIARQIKRLITQPIHQLEELSRQ VTREENYALRAARGNHDEIGSLAEAFNTMLSRIEAREQQLKRARDDSQAAYDQAQGLAEETRHTNRKLELEVQVRSKIEKKLTGFQNYLNSIIDSMPSAL IALDEQLYVTQWNQEASALSGTRLDEALNQPIFLAFEPLKPFLPQLKETVEQHTVTKVERVTWFKDEEPKHYALTFYPLMGGAGRGVVIRIDDITQRLSL EEMMVQSEKMLSVGGLAAGMAHEINNPLGAILHNVQNIRRRLSADLPKNLEHAQQIGVELQTVNRYLESREVPQLLDGIQQAGARAAKIVTHMLSFSRRS NRQMAPCDLPALIDQAVEIASNDFDLAIGFDFKGQAIIRQFDPNLGPVPGTANELEQVLLNLLKNAAQAIHQREDDSEPGRIILRTRLNPPWAEIQVEDN GIGMSENVRKRTFEPFFTTKEIGQGTGLGLSVSYFIITNNHKGQMEVQSTRGQGTCFTLRLPLASSQPLVQEPLPLEN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site