Pseudomonas fluorescens AU20219, AA067_RS30515
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU20219 Contig_79, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCAATAGGAAGAGGAACCTTGGTTGATCAGGGTCGGTTCAAAGGTCCAGATGGACGATTCAGCAGGAATGAAATTGGCTCGGTCCATCAGCAGCAAGAGG CTGTTGGAGAGCACTGGGGTCAGGACTCCCAGCCCCAGGACAGCCACTATCAGAACGATTATCCATCCATGAATCAGGCGAAGTGTCATTGGTTTTCCAT TAGCGCGATAAAAAATTCCGGCCTGTGCACAAGTCGGGATTCCAAAACTGTCGCACAAAAATAACGCTCTGATTTCAATTGTTTTTCGAAGCGCCAACGC GCACAGGCGAGCAAGGACAACGCTGCACCCCAGCCGCTGGGATCCTTCCCGCCGCCGGCGTGAAGCGCGAGTGGTCCCCCGTGACAACAGACTGCCTTTG AGCTCTTGCCGCGTCCCTGATTACTCTTTGATAATCCGCCGCTCGGGCCACCCACTGGCCCCAGGGAAGATGCGTATCGCATCGCAGGCGGAGTTTCAGC
|
|
| DNA Sequence for Gene |
>AA067_RS30515
ATGGATGTACAGGCCGCAGCGCGGTTGGGCGACGACATCGCCCATGGATTCGGAGTTGCTGCCATGCTCGCCGGCGCGGTCGCGGGCGCTCTCATAGGCG CGGCCATCATCGCGGCTACCGCGGCAACGGGCGGCCTGGCGGCGGTGATCCTGGCGGGTTCGGTCGCCGCCGGCGGCTTGTCGATGTTCCAGCTGGTAAA GGGACTTTCGACCATCTTCGATCTGCCCGAGCCAACCACCGGTGAACTCATAAGGGGCAGCCCCAACGTATTCGTCAACTTGCGCAATGCCATGCGTGCC GGCGAGGACGTGTCCAGTTCCTGTACCGGCTTTCCCGTGGCGCATCCCCCCTGGCCCTTCCCGGTCACCATCGCCGAAGGCAGCGCTACCGTTTACATCA ACGGCAAGCCGGCGGCGCGACTGAGCAGCAAGATGACCTGCGGCGCGCATATCAAGTCCGGTAGCCCGAACACCTTCATCGGCGGTCCGACGCTGCAGGT GGAGTTCGTGCTGGATATCGAGGGCTGGCTGCATACCGGCCTGGAGGCGCTGGGCCTGGTCGCCGCCGCTGGCGCGCTGGTGCTGGCCGCCATGGCCGGC CTCGCGGCCCTGCTGACCACCGTGGCGGTGGGGGCCGCGATCTATGGCGGCATGGAGTTGCTGGGCCAGCTCGGCGACCGGCTCGGCCCGGGCTACCGTG ACCTGCTGCAAGGTATCGCCGGCCTGGCGCTGCTCGGCGCCGGGCCGAAAATGGCCAAGTTGAGCGCCGAACGCAATGCCGCGCGACTGGCCAACCAGTC GCAGGTGCTCGAGGTGCGCACGGCCGCCCAGGTCAACGAGGCGATGATCGCCGAGGGCAACCTGCCGGCGTGGCTGGAAGGCACCCAGGTCAAGACCGAA ATAGTGCCGCCGGGAACGCAATACCAGATGGTCGTCGCCAAGGGCCAGGCCGAAGCCATCATGCAGGGCAAGCCAGCCTTCGGAGGTTTCGCCGCCCCCG AGCCGATTCCCAGCCAGGCCTATGCTCGGGATAAACTGGTGATCCTCGATCGATTCAAGACAGACGTATCCCATGTGATCACCGTCGAAACCACCGCACC GCAAAAGATTCACAGTGGTATCACCGGCCCGCTGGAGAACTACAAGGGCGGCGTGCAGCAGGTGGAGTTCGTCGGTGACAGGAATCTGAAAATTGTCGGC ACGCCTGGTGTGCTGCCTGTGGAGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AAGTTGTGATTAGTGATTTCGAGCGGATCCGCGAAGACGGCAAGGTCATCGACGAAAACATGACGGTGGACCAGATGATCGCCCTGGGGTGGTCTCCTTG CCGGGTCGTCGAGGCTCGCTGGCGCTGGCAGGAACAGCCCCTGAGCGTGGTCAACAGCCGCGGCCTGCTGGCGATTGTGGTGCCGGATCGGCAACACCTG GCCATCCTGTGGAACGATGACGATACGGGCGTGGCCGCAACCCTCTACGTGGTCTCCGGCGATCGCCAGCAACAGATCAGGATTGCCGACCAGTTGCTGA TCAATGGTCAGCTCGAGCCAGGTATCTACAGCTGGTTCGAGCAGTTCCCGCAGGTTTCGCCCAGCATCTTTACCTGCATGTTCAGCCGTCAGCATGACCA GGCAATGTTCAGGGTGGATATCGACGCGTCCACTGGCGACATTGTTTCGATACAGCACTCACGCTGAGCGCTGTTCAGCACCGCTACACTTGAGCGACGA
|
|
| Amino Acid Sequence |
>PAAR motif containing protein
MDVQAAARLGDDIAHGFGVAAMLAGAVAGALIGAAIIAATAATGGLAAVILAGSVAAGGLSMFQLVKGLSTIFDLPEPTTGELIRGSPNVFVNLRNAMRA GEDVSSSCTGFPVAHPPWPFPVTIAEGSATVYINGKPAARLSSKMTCGAHIKSGSPNTFIGGPTLQVEFVLDIEGWLHTGLEALGLVAAAGALVLAAMAG LAALLTTVAVGAAIYGGMELLGQLGDRLGPGYRDLLQGIAGLALLGAGPKMAKLSAERNAARLANQSQVLEVRTAAQVNEAMIAEGNLPAWLEGTQVKTE IVPPGTQYQMVVAKGQAEAIMQGKPAFGGFAAPEPIPSQAYARDKLVILDRFKTDVSHVITVETTAPQKIHSGITGPLENYKGGVQQVEFVGDRNLKIVG TPGVLPVE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|