Pseudomonas fluorescens AU20219, AA067_RS06355

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU20219 Contig_78, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGGCGACAACGCCGCCAAGGTCAAACTGACCCTGGAAGACGGCAGCCAGTACAAGCTCGATGGCAAGCTGGAATTCTCCGAAGTCTCGGTGGACGAAAC CACCGGCTCGGTGACCCTGCGCGCAGTGTTCCCGAACCCTGAGCACACCCTGCTGCCTGGCATGTTCGTCCACGCCCAGCTGCAAGCCGGGGTGAACAGC GCGGCGATCCTCGCTCCCCAGCAAGGCGTGACACGCGACCTGAAAGGCACCCCGACCGCCCTGGTGGTTGGCCCGGATAACAAGGTCGAGCTGCGCCAAC TCAAGGCCAGCCGTACGGTCGGCAACCAGTGGTTGGTGGATGATGGCTTGAAAGCCGGCGATCGCCTGATCACCGAAGGCCTGCAATTCGTCAAGCCGGG CATTGAAGTCAAGGCCAGCGAAGCGACCAACGTTCCAGCGAAGAACCCGGCCCCTGCACAGGCAACTGACAAAGCTGCAGGCGGCAAAGGGGAGTAAACC
DNA Sequence for Gene
>AA067_RS06355
ATGTCGAAATTCTTTATCGACCGTCCGATCTTCGCCTGGGTAATCGCCCTGGTGATCATGTTGGTCGGGGCTCTATCGATCCTCAAATTGCCGATCAACC AGTACCCGAGCATCGCCCCGCCAGCGATCGCCATCTCCGTGACCTACCCAGGTGCTTCCGCACAGACCGTGCAGGACACCGTGGTTCAGGTGATCGAACA GCAGCTCAACGGTATCGACAACCTGCGTTATGTGTCCTCGGAAAGTAACTCCGACGGCAGCATGACCATCACCGCGACCTTCGAACAGGGCACCAACTCG GACACCGCGCAGGTTCAGGTACAGAACAAGCTCAACCTGGCCACTCCGCTGCTGCCTCAAGAAGTGCAGCAGCAGGGTATCCGCGTGACCAAGGCGGTGA AGAACTTCCTGCTGGTGATCGGCGTGGTATCCGAGGACGGCAGCATGTCCAAGGACGACCTGTCGAACTACATCGTGTCGAACATGCAGGACCCGATCTC CCGGACCGCGGGCGTCGGTGACTTCCAGGTATTCGGTGCCCAGTACGCGATGCGGATCTGGCTCGACCCGGCCAAGCTGAACAACTACAACCTGACCCCC GTGGACGTGAAGACCGCGGTAGCCGCGCAGAACGTCCAGGTATCGTCCGGCCAGCTCGGCGGCCTGCCTGCCTTGCCCGGCCAGCAACTCAACGCCACCA TCATCGGCAAGACCCGCCTGCAGACTGCCGAGCAGTTCAAGGCGATCCTGCTGAAGGTCAACAAGGACGGCTCGCAAGTGCGTCTGGGCGACGTCGCGGA CGTCGGCCTGGGTGGCGAGAACTACGCCATCAGCGCCCAGTTCAACGGCAAGCCAGCATCCGGTCTGGCAGTGAAACTGGCCAACGGCGCCAACGCCCTG GACACCGCCAAGGCCCTGCGCAACACCATCAAGGACCTGGAGCCCTTCTTCCCGCAAGGGATGAAGGTGGTGTTCCCGTACGACACCACCCCGGTGGTGA CCGAATCCATCAAGGGTGTGGTTGAAACCCTGGTGGAAGCGATCGTCCTGGTGTTCCTGGTGATGTTCCTGTTCCTGCAGAACTTCCGCGCCACGGTGAT CACCACCATGACGGTGCCGGTGGTACTGCTGGGTACCTTCGGCATCCTTGCGGCAGCCGGCTTCAGCATCAACACCCTGACCATGTTCGGCATGGTGCTG GCCATCGGCTTGCTGGTGGACGACGCCATCGTCGTGGTGGAGAACGTCGAGCGGGTGATGCACGAGGAAGGACTGTCGCCCAAGGAGGCAACGAAAAAGT CCATGGGCCAGATCCAGGGAGCCTTGGTGGGTATCGCCCTGGTACTGTCCGCGGTACTGCTGCCAATGGCCTTCTTCAGTGGCTCCACCGGGGTGATCTA CAAACAGTTCTCGATCACCGTGGTCTCGGCCATGGCCCTGTCGGTGCTGGTGGCCCTGATCTTTACCCCAGCCCTGTGCGCCACCATGCTCAAGGCCGTA CCGCAAGGCGAACACGCTACCGAGAAGCGCGGCTTCTTCGGCTGGTTCAACCGTACCTTCGATCGCAGCGTGAAGAGCTACGAGCGCGGCGTGGGCAACA TGCTGCGCCACAAGGTTCCATTCCTGCTGGCCTACGTGCTGATCGTCCTGGGCATGATCTGGCTGTTCACCCGCATCCCGACCGCGTTCCTGCCGGAAGA AGACCAGGGCGTTCTGTTCGCCCAGGTACAGACCCCGGCCGGCTCCAGTGCCGAGCGGACCCAGGTGGTGGTGGACGAAATGCGCGCCTACCTGCTGGAC AAGGAAAAGGACACCGTGGCTTCGGTGTTCACCGTGAACGGCTTCAACTTCGCCGGTCGCGGCCAGAGCTCGGGCATGGCCTTCATCATGCTCAAGCCGT GGGGCGAGCGTTCCGCGGAAAACAATGTGTTCAACCTGGCAGCCCGCGCCCAGCAGCACTTCTTCAGTTTCCGTGACGCGATGGTGTTCGCCTTCGCCCC TCCAGCGGTACTGGAACTGGGTAACGCCACCGGTTTCGACGTGTTCCTCCAGGACCGCGCCGGTATCGGCCATGAGAAACTGATGGCTGCACGCAACCAG TTCCTCGGCATGGCGGCCCAGAGCAAGGTGCTGTCCCAGGTGCGCCCGAACGGCCTGAACGATGAACCGCAGTACCAGTTGACCATCGACGACGAGCGCG CCAGTGCCCTGGGCGTGACCCTCACCGACATCAACAACACCCTGTCGATTGCCCTGGGCAGTAGCTACGTCAACGACTTCATCGACCGTGGTCGGGTGAA GAAGGTGTACATCCAGGGTCAGGCCGGTGCTCGCATGAGCCCCGAAGACCTGAAGAAGTGGTACGTTCGCAACAGCGCCGGAACCATGGTGCCGTTCTCC TCCTTCGCCAAGGGCGAGTGGATCTACGGTTCGCCCAAGCTGGCCCGTTACAACGGTGTGGAAGCCATGGAAGTGCTCGGTGCCCCGGCCCCTGGCTACA GTACCGGTGAAGCCATGGCCGAAGTCGAAGCCATTGCCGCGAAGCTGCCGGCGGGTGTCGGTATCTCCTGGACAGGCCTGTCCTATGAGGAGCGCCTGTC GGGCTCCCAGGCACCTGCGCTGTACGCCTTGTCCCTGCTGATGGTGTTCCTGTGTCTGGCGGCGCTGTATGAAAGCTGGTCGATTCCGATCGCGGTGATG CTGGTAGTGCCCCTGGGGATCATCGGTGCACTGATGGCAACCAGCATGCGTGGCCTGTCCAACGACGTGTACTTCCAGGTGGGTCTGTTGGTGACCATCG GCCTGGCGGCGAAAAACGCCATTCTGATCGTCGAGTTCGCCAAGGAACTGCACGAACAGGGCCGCAGCCTGGTAGACGCCGCGGTGGAAGCCTGCCGGAT GCGTCTGCGGCCGATCATCATGACCTCCCTGGCCTTCGTCCTCGGGGTCGTGCCACTGGCCATCTCCACCGGCGCCGGCTCGGGCAGCCAGCATGCGATC GGTACCGGGGTGATCGGCGGTATGCTCACCGCGACTATCCTGGCGATCTTCTGGGTGCCACTGTTCTTCGTCACCGTATCGTCCATGGGCCGCAGGAAAG CGGACCTGTCAGAAACTACTGCAACCCCTAATGAGGCTGGCCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAAGTCGCTACTCTCCCTGGCAATCACCGCCATCGCGCTAAGTGGTTGCTCGCTGATCCCGGATTACCAGCGCCCGGAAGCGCCGGTGGCGGCGCAGTT CCCCCAAGGCCCTGCGTACTCGCCAAAGGAGGCCGCCAACGTGGCGGCCGCCGAACAGGGCTGGCGGCAGTTCTTCCATGACCCGGCGCTGCAGCAACTG ATCCAGACGTCCCTGGAAAACAACCGCGACCTCAAGGTCGCGGCGCTGAACATCGACGCCTATGCCGCGCAGTACCAGATCCAGCGTGCGGACCTGTTCC CGGCGGTTTCGGCCAACGGCAGCGGCAGCCGGCAACGACTGCCAGCCCGGGCCTCGAGCACCGGCAAGGAAATGATCTCCAGCCAGTACTCGGCCACCGT GGGCGTCAGTGCCTATGAACTGGACCTGTTCGGCCGCGTTCGCAGCTTGAGCGAACAGGCCTTGCAGACCTACTTCTCCAGCGAAGAAGCCCGGCGCAGT
Amino Acid Sequence
>multidrug transporter
MSKFFIDRPIFAWVIALVIMLVGALSILKLPINQYPSIAPPAIAISVTYPGASAQTVQDTVVQVIEQQLNGIDNLRYVSSESNSDGSMTITATFEQGTNS DTAQVQVQNKLNLATPLLPQEVQQQGIRVTKAVKNFLLVIGVVSEDGSMSKDDLSNYIVSNMQDPISRTAGVGDFQVFGAQYAMRIWLDPAKLNNYNLTP VDVKTAVAAQNVQVSSGQLGGLPALPGQQLNATIIGKTRLQTAEQFKAILLKVNKDGSQVRLGDVADVGLGGENYAISAQFNGKPASGLAVKLANGANAL DTAKALRNTIKDLEPFFPQGMKVVFPYDTTPVVTESIKGVVETLVEAIVLVFLVMFLFLQNFRATVITTMTVPVVLLGTFGILAAAGFSINTLTMFGMVL AIGLLVDDAIVVVENVERVMHEEGLSPKEATKKSMGQIQGALVGIALVLSAVLLPMAFFSGSTGVIYKQFSITVVSAMALSVLVALIFTPALCATMLKAV PQGEHATEKRGFFGWFNRTFDRSVKSYERGVGNMLRHKVPFLLAYVLIVLGMIWLFTRIPTAFLPEEDQGVLFAQVQTPAGSSAERTQVVVDEMRAYLLD KEKDTVASVFTVNGFNFAGRGQSSGMAFIMLKPWGERSAENNVFNLAARAQQHFFSFRDAMVFAFAPPAVLELGNATGFDVFLQDRAGIGHEKLMAARNQ FLGMAAQSKVLSQVRPNGLNDEPQYQLTIDDERASALGVTLTDINNTLSIALGSSYVNDFIDRGRVKKVYIQGQAGARMSPEDLKKWYVRNSAGTMVPFS SFAKGEWIYGSPKLARYNGVEAMEVLGAPAPGYSTGEAMAEVEAIAAKLPAGVGISWTGLSYEERLSGSQAPALYALSLLMVFLCLAALYESWSIPIAVM LVVPLGIIGALMATSMRGLSNDVYFQVGLLVTIGLAAKNAILIVEFAKELHEQGRSLVDAAVEACRMRLRPIIMTSLAFVLGVVPLAISTGAGSGSQHAI GTGVIGGMLTATILAIFWVPLFFVTVSSMGRRKADLSETTATPNEAGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site