Pseudomonas fluorescens AU20219, AA067_RS06150

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU20219 Contig_78, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCGGTAGCTGTTGTTCAGGTCCAACTCGATCTGCACCTGGGGATAGTGCCGGGAGAACTCCAGCAGCAGGCCGTCGAAAAAGGTTTCGCCCAGGGAGAC CGGAACGGTGAGGCGCACCGGCCCGGCCATATCGTCCTTGAGCCGCGCCAGGGCCTGGTGTGCCCGCTCGACCTGAGCCACCAGGGCCTGGGCCTGGGGC AGCAACGCCGCGCCGGCGGCCGTGAGGTCCAGGCGCCGGGTGGTGCGTTGCAACAGTACCACGGCGTAGCGGGCTTCCAAGGCGCTGATGCGTTTAGAGA GCTGGCCCTTGCTGCAGCCCAACTGCTGGGCTGCCAGGGTAAAGCTGCCGGCCTCTACCAACACTGCAAATGCCGCCAGGTCATCCATCTCACTCACGGA TTGTTTCCATTTGAAAACCAAAGGTTGCCTATTAGCGCGTTAATTCATGAAAAAAACCACTCTAGACTGCAACCTCATCCCCCTTTTCGAGGAACAGCCC
DNA Sequence for Gene
>AA067_RS06150
ATGAAGATTCTCTTGATCGGTGCCAACGGCACCATTGGTTCGGCGGTCGCGCGGGAGCTGGAACAACGTCATGAAGTGGTGCGCATCGGCCGTACCAGCG GTGATTTCCAGGTGGATATCAGCGACAGCCAGTCGATCCGCGCCCTGTTCGAGAAGACCGGGCGCTTCGATGCGCTGGTGTGTGCCGCCGGTAACGTGAC CTTCGCACCACTGGGGGAAATGACTGCCGAGCACTTCAGCCTGGGCCTCAAGGACAAGCTGATGGGCCAGGTCAACCTGCTGCTGATCGGCCGCGAGTAC GCCAACGACGGCGCCTCCTTCACCTTCACCACCGGCGTCCTGAGCCACGACCCGATCCGCAGCGGCGCCTCGGCCGCCCTGGTCAACGGCGCCATCGACA GCTTCGTGCGGGCCGCTGCCATCGAGCTGCCCCGGGGCCTGCGGGTCAACTCCATCAGCCCCAACGTGCTGCTGGAAGCCATGGACAGCTACGCGCCCTA CTTCCGTGGCTTCAAGCCGGTGCCGGCGGCCGACGTGGCCCTGGCCTACGCCAAGAGCGTGGAAGGCCTGCAGACCGGCCAGACCTATCGCGTCGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCCCGTTTGCGTGGGGCTGGCTTGTGTAGGAGCTGGCTTGCCAGCGAAGGCGTCCTCCCGAACCCCACCAGACTTCAGGGTCTCTTCGCCGGCAAGCCGG CTCCTACGGTTGGGCGCTGCTGCGTTCAGTCCGGGCTTGTGATGGCCGGGCGGGCTGCGTAACGTGTCGGCTTCCGCTTGGAGGCCCAATGATGCGCACC GCCCGTTCCCTGCTTTGTTTCGCCCTGTTGCCGCTGTTTGCCGGCTGCCAGATGCTGCCGATGTTCAACCCACAGCCCCAGGCGCCGTCCATGGCCGGGT TGACCCGGATGCAGGGTGAACTCAGTGCCGCCGATGGCAAGCTGCTGTTCAAACCCTGCACCGAAGACCGCCGTTATGTGGTCAACGATGGCGGCAACAC CAGTGTGCTGCAGGAGGCGGCAACCCTGGCCGAGAAGCAGGGCAAGCTGTTTGCCGACCTGCGGGGCAAGTTCTCCGCCAATGCCAGCAGCGACGGTCAG
Amino Acid Sequence
>short-chain dehydrogenase
MKILLIGANGTIGSAVARELEQRHEVVRIGRTSGDFQVDISDSQSIRALFEKTGRFDALVCAAGNVTFAPLGEMTAEHFSLGLKDKLMGQVNLLLIGREY ANDGASFTFTTGVLSHDPIRSGASAALVNGAIDSFVRAAAIELPRGLRVNSISPNVLLEAMDSYAPYFRGFKPVPAADVALAYAKSVEGLQTGQTYRVG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site