Strain | Pseudomonas fluorescens strain AU20219 Contig_76, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGGGGCGACGATTCTCGGCGATGGCCGGGTGGTGCTGATTCTCGACTTGCTGGCGCATATCCGCGCCTTGCAGGCCCAGGCGCCGCTGCCGCGCCTGGCG GGCGACGAGCCGGCCAGCGAGGTGCAACCGCCGCGGCCGATGCTGGTGCTGGTGGTGGACGACTCGGTCACGGTGCGCAAGGTCACCAGCCGCCTGCTGG AGCGCCACGGCATGAACGTGCTCACCGCCAAGGACGGGGTCGACGCCATGGCGCTGCTGGCCGAGCACACCCCGGACCTGATGCTGCTGGACATCGAGAT GCCGCGCATGGACGGCTTCGAGGTGGCGATCCAGGTACGCAACGACCCGCGCCTGCAACACCTGCCGATCATCATGATCACCTCCCGCACCGGGCAGAAA CACCGCGACCGGGCCATGGCCATCGGCGTCAACGACTACCTCGGCAAGCCCTATCAAGAGTCGGTGCTGCTGGAAAGCATCGCCCAGTGGAGCAAGACCC
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DNA Sequence for Gene |
>AA067_RS28590
ATGCTTGATCACCGCGCCAGCACCCTCACCGGGCTGCTGCTGCCCCTGGCCGACCGCACCCTGATCCTGCCCAACGTGGCCGTGGCCGAGCTGATCGACT ATCAGCAGGGCACCTTCGACCTGGATTCACCGCCCTGGTACCTGGGCCGGGTGCTGTGGCGCGAGCGGCGGATTCCGCTGATCAGCTTCGAGTCGGCCTG CGGTGGCAGGACCGTGATTGGCGAGCGGGCGCGGATCGTCGTGCTCAATGCCCTGGGCGGGCGCCCGGAGCTGAAGTTCATGGCCCTGCTGGTGCAGGGC ATTCCCCGCTCCTGCAAGCTCGACAGCCAGTTGAGCTATGTCGACGTGCCCCTGGCTGCGCTGGAAAAGGCCGCAGTGCAGGTGGCCGAGCAGGTGGCGA AGGTGCCGGACCTGCTGGCCCTGGAGGAATTGCTGGTGGCGGGGCTTTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCCTCGCCACCCAAAACCGCCGGTAGGAGCTGGCTTGCCAGCGAAGGCAGCCCCTCAGCCAATGCGCAACCTGTCCCGCACCTCCATCAGCGCATAGCC CAGCAGATTCAGGCCGCGCCACTGTTCCGGCCGGCTGGCCCTGGCGTCGTCGGCGGCCAGGCCGATGCCCCAGATCCGGTCCACGGGGCTGGCTTCCACC AGTACCTGGTCGCCTGTGGACAGCAGGTATTCACCCAGGGCCGGATGTTGGCTGAACTTGGCCAGGTTGCCCTGCACCACGATATCCAGGCGTGCTTCGG TCCAGCGGGCGTCATCGAAGCCGCGCACCTCGCGGCCCAGTTGCTTCACGTCGGCGGGCGTCACGGCCTTGAGGATCCGCTCGTGGGTTTCCTGGTCGCC GAACAGCAGGGCCTTGCCGGCCATCATGAAATGCTCGGCGCTGGGGTATTGAATGCCATCGAGTTCCAGACCTGCGTCGAACCACTGGCTGAAACAGCTC
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Amino Acid Sequence |
>chemotaxis protein
MLDHRASTLTGLLLPLADRTLILPNVAVAELIDYQQGTFDLDSPPWYLGRVLWRERRIPLISFESACGGRTVIGERARIVVLNALGGRPELKFMALLVQG IPRSCKLDSQLSYVDVPLAALEKAAVQVAEQVAKVPDLLALEELLVAGL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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