Pseudomonas fluorescens AU20219, AA067_RS28510

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU20219 Contig_76, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTTTCACCCTGGCCTGTGGCAGCGGCCAGTTACTGGGCGAACTGATCGGCCAGCGCTCCACCAGTATCGACATGCAGGGCCTGGCGCCCCGCGTTGCCTG AACGTTAAAAGGAGTCTTCAGATGAGTATCCAGCGTATCCACAGCAACGAGCGCCTCAGTGGCGCGGTGACCTTTGCCGCACTGGTGTTTCTTTCCGGGC AGGTGCCGGGGGCCAGCAGCGATATCGGCGGCCAGACCCGCGAGGTGCTGGAGAAGATCGAGGCCTTGCTGGCCGAGGCTGGCAGCGACAAGGAGCACCT GCTCAGCGCGACGATCTACCTCAAGGACATCCAGGCCGATTTCGCGGTGATGAACGAAGTCTGGTCGGCCTGGCTGTCCCCCGGCCAGGCGCCGGCGCGC ACCACCTTGCAGGCGGCCCTGGCGCGCCCGCAGATCCTTGTCGAAATCAGCGTCATCGCGGCCCGCCGCTAACTGCCCTTACCCACAACGGAGAATAACA
DNA Sequence for Gene
>AA067_RS28510
ATGCATAAGATCACGTTGCTCGGCTGCACCTTGGGGCTGCTGTTCAGCGCCATGTCCCAGGCCAATGAAGCACCTCTGGAGGGCACCCTGGCGAAGATCG CCAACAGCGCCAGTATTACCTTGGGTTATCGCGATGCCTCGGTGCCCTTTTCCTACGTGGGGGATAACAGCGGCAAGCCCATGGGCTATTCCGTGGAGCT GGCGAGCAAGGTGGTGGAGCGCATCCAGCAGCAGTTGCACTTGCCCAACCTGAAGGTGAAATACAACCTGGTGACCTCGCAGACCCGCATTCCCCTGGTG CAGAACGGCACCGTGGACCTGGAGTGCGGTTCCACCGGGGTGACGGCCGAGCGGCAGAAGCAGGTGGCGTTCTCCTACGGCTTCATCTACGTCAAAGGCC AGTTGCTGACTGCCAAGGACAGCGGGATCAAGAGCTTCGCCGACCTGCGGGGCAAGAACGTGGTGACCACGGCGGGGACCACCAACGAGCGCTTTCTCAA GAGCTACAACGTCGAGCACAAGATCGACATGTTCGTGATCAGCGCCAAGGACCACGGCGAGGCCTTCCAGATGCTCCAGTCGGGGCGTGCGGCGGCGTTC TACATGGACGATGCGTTGCTGTACGGCGAGCGGGCCAAGGCCCGGGACCCGCACAACTGGGTGGTAGTGGGGGAAGAACAGTCGCGCGAGATCTACAGCT GCATGGTGCGCAAGGATGACCCGCAGTTCCTGGCCCTGGTCAACGGTGCCCTGGCGGACCTGTACCGCTCCGGGGAGATCAATGGCATTTACCAGCGCTG GTTCCAGGAGCCGATTCCGCCCAAGGGCCTGAACCTGGAATTCCCCATGACCAGTGAACTCAAAGCGATCATCGCCCAGCCCACCAGCGATCCGGTGCAA TAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCACCACCAGGAGGGGTTAGAAGTCGCCCCACAGTTGCTGGGCCACGGCCAGGGCCACCACGGGAGCGGTTTCGGTACGCAGCACTCGTGGCCCCAGGCG CGCGGGGAGGAAACCGGCGCTGTGGGACAGGTCCACTTCGGCGTCTGTCAGGCCGCCTTCAGGGCCAATGAGGAACGCCAGGCTGGCAGGCTTGGCGTGG CTTTCCAGGGGCTGGGCCACGGGGTGCAGCACCAGCTTCAGGTCGGCCCGGGCCTGCTTGATCCAGTCCGCCAGCAGCACGGGCGGGTGGATCACCGGGA CCTGCGAGCGGCCGCACTGTTCGCAGGCGCTGATGGCCACCTGGCGCCAGTGCAGCAGGCGCTTGTCGGCGCGTTCGTCCTTGAGCCGCACTTCGCAGCG CTCGCTGAAGATCGGGGTGATTTCGCTGACCCCAAGCTCCGTGGCTTTCTGGATCGCCCAGTCCATGCGCTCGCCCCGGGACAGGCCCTGGCCCAGGTGA
Amino Acid Sequence
>ABC transporter
MHKITLLGCTLGLLFSAMSQANEAPLEGTLAKIANSASITLGYRDASVPFSYVGDNSGKPMGYSVELASKVVERIQQQLHLPNLKVKYNLVTSQTRIPLV QNGTVDLECGSTGVTAERQKQVAFSYGFIYVKGQLLTAKDSGIKSFADLRGKNVVTTAGTTNERFLKSYNVEHKIDMFVISAKDHGEAFQMLQSGRAAAF YMDDALLYGERAKARDPHNWVVVGEEQSREIYSCMVRKDDPQFLALVNGALADLYRSGEINGIYQRWFQEPIPPKGLNLEFPMTSELKAIIAQPTSDPVQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site