Pseudomonas fluorescens AU20219, AA067_RS16345

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU20219 Contig_72, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACTTCGTCGACAACCAGGTCAACCCCAAGACCGGCACCATCCGGGGCCGCGCAGTGTTCGACAACAGCGACGGCAGTTACACCCCGGGCCTCTATGCACG CCTGAAACTGGTGGGCAGTGGCACCTACTCGGCGATGCTGATCAACGACGAAGCCGTGGGCACCGACCTGGGCAAGAAGTTCGTGCTGGTGATGGACGCC GACAACAAGCCAGCCTACCGCGCCGTGGAACTGGGGCCGAAGATCGAAGGCCTGCGCATCGTGCGCAACGGCCTGAGCAAGGACGACACCATCATCGTCA AGGGCTTGCAGCGGGCACGTCCCGGCGCACCGGTCACGCCTGAAGTGATCCCCATGGCCAGCAAGGAAACCCTCGCCGCCCTGGCCCAACAACGCCAAGC ACTGGAAGCCAGCAACCTGCAGCAGGTCACCCCTGCCAAGGCGGCTCCGGCTGTGAAACTCGCCGCTGCGACACCGCGCGGTTAAGGGACGACTCTCAAG
DNA Sequence for Gene
>AA067_RS16345
ATGAATTTTTCCCAGTTCTTCATTTCAAGGCCGATCTTCGCCGCGGTGCTGTCGCTGCTGATCCTGATCGCCGGCGCCATCTCGCTGTTCCAGCTGCCCA TCAGCGAATACCCGGAAGTGGTGCCGCCCACCGTGGTGGTGCGCGCCAACTTCCCGGGGGCCAACCCGAAAGTCATCGGTGAAACCGTGGCCGCGCCCCT GGAACAGGCGATCACCGGGGTCGAGAACATGCTCTACATGTCCTCGCAATCCACCGCTGACGGCAAGATCACCCTGACCATCACCTTCGCCCTGGGCACC GACCTGGACAACGCCCAGGTGCAGGTGCAGAACCGTGTGACCCGCACCCAGCCCAAGCTGCCCGAAGAAGTGACGCGCATCGGCATCACCGTGGACAAGG CCTCTCCGGACCTGACCATGGTGGTCCACCTGACCTCGCCGGACAAACGCTACGACATGCTCTACCTGTCCAACTACGCCCTGCTCAACATCAAGGATGA GCTGGCGCGCCTGGGTGGCGTGGGGGATGTGCAGCTGTTCGGCATGGGCGACTACTCGCTGCGGGTGTGGCTGGATCCGAACAAGACCGCCTCGCGCAAC CTGACCGCCACCGACGTGGTCACCGCCATCCGTGAACAGAACCGCCAGGTTGCCGCCGGTGCCCTGGGCGCGCCGCCTGCGCCCACCGCCACCAGCTTCC AGCTGTCGGTCAACACCCAGGGCCGCCTGGTCACCGAGGAAGAGTTCGAGAACATCATCATCCGCTCCGGCGAGGACGGTGAGATCACCCGCCTGAAGGA CATCGCCCGCATCGAGCTGGGGTCGAGCCAGTACGCCCTGCGTTCCCTGCTCAACAACCAGCCGGCGGTGGCGATCCCGATCTTCCAGCGCCCGGGTTCC AACGCCATCGAGATCTCCAATGAAGTGCGGGCCAAGATGGCCGAGCTCAAGCAGAGCTTCCCGCAAGGCATGGACTTCAGCATCGTCTACGACCCGACCA TCTTCGTCCGCGGCTCCATCGAGGCGGTGGTGCACACCCTGTTCGAAGCCCTGGTGCTGGTGGTGCTGGTGGTGATCCTGTTCCTGCAGACCTGGCGCGC CTCGATCATCCCGCTGGTGGCCGTACCGGTGTCGCTGATCGGTACCTTCGCGGTCATGCACCTGTTCGGTTTCTCCCTCAACGCCCTGTCGCTGTTCGGC CTGGTGCTGGCCATCGGCATCGTGGTGGACGACGCCATCGTGGTGGTGGAGAACGTCGAACGTAACATCGGCCTGGGCCTGAACCCGGTGGAAGCCACCA AGCGCGCCATGCGTGAAGTGACCGGCCCGATCATCGCCACCGCCCTGGTGCTGTGCGCGGTGTTCGTACCAGCAGCCTTCATCAGCGGCCTGACCGGGCA GTTCTACAAGCAGTTCGCCCTGACCATTGCCATCTCCACGGTGATCTCGGCCTTCAACTCCCTGACCCTGTCGCCGGCCCTGGCCGCGGTATTGCTCAAG GAACACCATGCGCCCAAGGACCGTTTCTCGAAGATCCTCGACAAGCTGCTGGGGGGCTGGCTGTTCAAACCCTTCAACCGCTTCTTCGATCGCGCCAGCC ATGGCTACGTCGGCACCGTGCGCCGGGTCATCCGCGGCAGCGGCATCGCCCTGTTCCTCTATGCAGGCCTGATGGTGCTGACCTGGTTCGGCTTCGCCCA CACCCCGACCGGTTTCGTCCCGGCCCAGGACAAGCAGTACCTGGTGGCCTTCGCCCAACTGCCGGACGCCGCCAGCCTGGACCGCACCGAAGACGTGATC AAGCGCATGTCCGACATCGCCCTCAAGCAGCCCGGCGTGGAAAGCGCGGTGGCCTTCCCTGGCCTGTCGATCAACGGCTTCACCAACAGCCCGAACAACG GCATCGTCTTCGTCACCCTGAAACCGTTCGACGAACGCAAGGACCCGAGCATGTCCGCCGGTGCCATCGCCGGCGCCCTGAACGGCAAGTACGCGGATAT CCAGGACGCCTACATGGCGATCTTCCCACCGCCGCCGGTACAGGGCCTGGGAACCATCGGCGGCTTCCGCCTGCAGGTGGAGGACCGCAGCGGCCTGGGC TACGACGAGCTGTACAAGGAAGTGCAGAACGTCATCACCAAGAGCCGCAGCGTGCCGGAACTGGCCGGGCTGTTCACCAGCTACCAGGTCAACGTGCCCC AGGTGGATGCTGCCATCGACCGGGAAAAGGCCAAGACCCACGGCGTGGCGATCTCCGACATCTTCGACACCCTGCAGATCTACCTGGGTTCGCTGTATGC CAACGACTTCAACCGCTTTGGCCGCACCTACCAGGTCAACGTCCAGGCCGAGCAGCAGTTCCGTCTCGAGCCCGAGCAGATCGGCCAGCTGAAAGTGCGC AACAACAAGGGCGAGATGATCCCCCTGGCCACCTTCATCAAGGTCAGCGACACCGCAGGCCCCGACCGCGTGATGCACTACAACGGCTTCGTCACTGCGG AAATCAACGGCGCAGCGGCCCCGGGCTACAGCTCCGGGCAAGCGGAAGCGGCGATCGAGAAACTGCTCAAGGAAGAACTGCCCAACGGCATGACCTACGA ATGGACCGAGCTGACCTACCAGCAGATCCTGGCCGGTAACACCGCGCTGTTCGTCTTCCCGCTCTGCGTACTGCTGGCCTTCCTGGTGCTGGCCGCGCAA TACGAGAGCTGGAGCCTGCCACTGGCGGTGATCCTGATCGTGCCCATGACCCTGCTGTCGGCCATTACCGGGGTGATCGTCTCCGGCGGCGACAACAACA TCTTCACCCAGATCGGCCTGATCGTGCTGGTGGGCCTGGCCTGCAAGAACGCGATCCTGATCGTCGAGTTCGCCAAGGACAAGCAAGAGGAAGGCCTCGA CCCGCTGGCTGCGGTGCTGGAAGCCTGCCGCCTGCGTCTGCGGCCGATCCTGATGACCTCCTTCGCCTTCATCATGGGCGTGGTGCCCCTGGTGATCTCC AGCGGCGCCGGTGCGGAAATGCGTCATGCCATGGGTGTCGCGGTGTTCTCCGGGATGCTCGGGGTGACCTTCTTCGGCCTGCTGCTGACTCCGGTGTTCT ATGTACTGATCCGCAACTACGTGGAGCGCAGCGAGGCGCGCAAAGCCGCCCGCGCTCTGCAACTGGAGGCGCAACAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTTCCAAAGTCTTCCTGCCGAGCCTGCTGGTGCTGGCCCTGAGTGCCTGCGCCGTCGGTCCGGACTACCAGACGCCAACCACCGAGGCGGCGCACATCAG CGCCGCCACCGATGGCGCCGCGGGCCAGAAGAACTTCGACCGCGCACGCTTCGAAGGCATCTGGTGGCAGCAGTTCGATGACCCGACCCTCAACCAGCTG GTGAGCAAATCGTTGCAGGGCAACCGTGAACTGCGGGTGGCCTTCGCCCGCCTGCGGGCCGCCCGGGCGATTCGCGATGACGCCAGCAATGACGCCATGC CCACCATCACCAGCCGCGCCAGCAGCGACCTGGCCAAGGGGCAGATCCCCGGCCAGACCACCAAGCGAGTCAACAGCGAGCGCTACGACCTGGGCCTGGA CATGGCCTGGGAACTGGACCTGTTCGGCCGCATCCAGCGCAACCTGGAAGCCACCGACGCCGACCAGCAGGCCGCCGAGGCCGACCTCTACCAACTGCAG
Amino Acid Sequence
>transporter
MNFSQFFISRPIFAAVLSLLILIAGAISLFQLPISEYPEVVPPTVVVRANFPGANPKVIGETVAAPLEQAITGVENMLYMSSQSTADGKITLTITFALGT DLDNAQVQVQNRVTRTQPKLPEEVTRIGITVDKASPDLTMVVHLTSPDKRYDMLYLSNYALLNIKDELARLGGVGDVQLFGMGDYSLRVWLDPNKTASRN LTATDVVTAIREQNRQVAAGALGAPPAPTATSFQLSVNTQGRLVTEEEFENIIIRSGEDGEITRLKDIARIELGSSQYALRSLLNNQPAVAIPIFQRPGS NAIEISNEVRAKMAELKQSFPQGMDFSIVYDPTIFVRGSIEAVVHTLFEALVLVVLVVILFLQTWRASIIPLVAVPVSLIGTFAVMHLFGFSLNALSLFG LVLAIGIVVDDAIVVVENVERNIGLGLNPVEATKRAMREVTGPIIATALVLCAVFVPAAFISGLTGQFYKQFALTIAISTVISAFNSLTLSPALAAVLLK EHHAPKDRFSKILDKLLGGWLFKPFNRFFDRASHGYVGTVRRVIRGSGIALFLYAGLMVLTWFGFAHTPTGFVPAQDKQYLVAFAQLPDAASLDRTEDVI KRMSDIALKQPGVESAVAFPGLSINGFTNSPNNGIVFVTLKPFDERKDPSMSAGAIAGALNGKYADIQDAYMAIFPPPPVQGLGTIGGFRLQVEDRSGLG YDELYKEVQNVITKSRSVPELAGLFTSYQVNVPQVDAAIDREKAKTHGVAISDIFDTLQIYLGSLYANDFNRFGRTYQVNVQAEQQFRLEPEQIGQLKVR NNKGEMIPLATFIKVSDTAGPDRVMHYNGFVTAEINGAAAPGYSSGQAEAAIEKLLKEELPNGMTYEWTELTYQQILAGNTALFVFPLCVLLAFLVLAAQ YESWSLPLAVILIVPMTLLSAITGVIVSGGDNNIFTQIGLIVLVGLACKNAILIVEFAKDKQEEGLDPLAAVLEACRLRLRPILMTSFAFIMGVVPLVIS SGAGAEMRHAMGVAVFSGMLGVTFFGLLLTPVFYVLIRNYVERSEARKAARALQLEAQQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site