Pseudomonas fluorescens AU20219, AA067_RS25985

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU20219 Contig_59, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGGTCGCGGCCCTGCGCAACAGGTTGCCCTGATGACGCGCTTGCCAGGTCAGGTTCCTCTCGGGCAGCGGGGCATGGCCTTGCTGGTCAGCCTGGTGTTC CTGTTGCTGCTGACCCTGATCGGGCTCTCGTCGCTGCAGAACGCCACCCTGCAGGAAAAAATGGCTGCCAGCCTGACTCTGCACAACCGCGCATTTCAGG CCGCCGAAGCTGCGCTGCGGGTGGGGGAGAGTGCGGTGCAACAGGATGATTTCCGCTTGCCGGTATGTGCCAGCCCTGCTCAGTGCGCGCCTCCCGCCGA ATCAGCGCAGGTCAACGCTCCTGGAGTCAATGCAGCTTCGGCGGTGCTGTGGATCGCTAGCGGCTCTGGCTTCTACGGGGTGCAGAACCTCGGTGTTTCA CAGGATGCGGTGAATGTGCCGAGCAATACTCCAGCCACCTTGTATCGCGTGACCGCTGTCGGTCTGGCCGGGCAATCGCGCAGTGTGCTGGAGAGCATCT
DNA Sequence for Gene
>AA067_RS25985
ATGCCAAGTATTGATCGGGGCATTCGTCGGCCCGGCTGGCGAAGCCTGGGCGCGCTGCTGCTGAGCCTGTTGCCGGTACCTCTGGCCATGGCGTTCAACC CTGCCAGCACCCCGCTTCTTGGTGCCGCGGCGGTGGCGCCGAACGTGATGTTGGTGCTGGATGACTCCCTGGGCATGAACAGCATTGTCCATGCCCGGGA GTTCGATCCGCTGCTCGCCCGGGCTGCGGTCTGGCGCTGTGCCGGAGTGGGGGGCGAGTGTGCTCGGGGTGAGCGACTTGCAGGCCAGGCGATTGCCTTG TCCAGCCTCGGCGAGTCGGGGTGCCGGGCAGGCTTTCACAGCTTCCATGATCCCGAACGTGGGGTGCGCTGCCTGAAGCTGCCGGACCCGGTTGGGGCTG GAAATACGCTGTACTCAGCGGACTACCTGTCCTGGCTACTGGCGCAGGCCAAGGGACGGGAGCGAGACTTCACTGACGGTTCCATTCCCAACGACTACCG GATGAATGTGGCGCGGCGGCTGGCCACGGCCCTGGTGACCCGGTATCGCTGGCTGCGCCTGGGGTTGGCCACCTTCAATCCGCCGGCCCCGGGTGATCCG GGCCCTGGGGGTTACATTGCCCGTCCCATCAGCGACCTGTCGGCCATTGAAGGCGCTGTGAGCCCGGCCCAGGCCGAGGCCAATTACCAGGCCCTGCTGG CGACAATCAATGGCCTCAAGGCCGGCGGTCGTACGCCGTTGGCGGAAACCTACTACGAGATTACTCGCTACCTGCGCGGCATGGTGCCGTACTACAACCT TTCACCGGCGCTCTACAGCAGTCCCATTCAATACCGTTGCCAGAAGAACTACGGGGTGGTGATCAGTGCCGGGGCAGCGGATCACGATACTCAGTTCCCG CTCAACGATCCGCTGGGGGCGGGGCGCCTGCCCAACTGGGACGGGATCGGCAACGACGGTAGCGAGCGTGATGGGCAGACCCTGTACCTCGATGACCTGG CCAAGTTCGCCTTCGATATCGACTTGCGTGGCCCAGGAGTGGATGAGGCCGGGAAAAGCTGGGCGGCGGTGGATTTCCCCCGTCAGTACCTGAATACCTT CACGGTGGGTTTCCAGGCACACAATCCTCTGCTGATGGGCGCTGCGGACTACGGTCAGGGTGAGTATTTCCAGGCCCGCAGCAACCTTGAGCGCGTGCTC GCAGGCGTTCTGGGCGAAGGCATAGCCAGTGTCGTGACTGCTGGCAGTGGTGTACTGGATGCCGCCAGTGGTCGTTATTACCAGAGCCAGTACGACCCGC TCGATTGGCATGGCACGATCCGCGCCTATGGCATCGACAATCAGGGCCGAGTGGCTGTCGATTCGCCGTTGTGGAGCAGCGATAGCGGCGTGGAGGGTGC CGGCGCGGAGGCAATCCATGAGACCTGGAACACTGCCAGCCGACGTCCGGTGAGCCTGGCCTATGGCAACTTGTCCACCGCTCAGCGTGGCGAACTTGAG CAGTCGTTGCCTGCAGGTGTCAGTGGCGCCGAGCTATTGGACTGGAGCCAGGGCCGCTCCGTGAGCGGGCTCAGGGAGCGCCGCTATCAGTTGGGAGATA TCGTCAATTCGCCGCTGGTGCTGGCCACTGCCGGGCAGCGCAGTGCTGTCGATGGGGCTGACGGGGGCGACTACAGCCGCTACCTGGCACAGAAAGCCAC GGCCATGGCGACGCGCTTGTTGGTGAACAGCAATGACGGGTTGTTCAATGTGCTGGACCCGGCCAGGGGTGAGCGCCTCTATGGCTACATGCCCTCCAGC GCGTTGGGCGCCCTGGCGCAGATCGCCGATCCCGGTTATCGGCGGGGCGAGCGCCATCGCTATCTGGTGGATGGCCCCCTGGCGGTGTTCGATGGGCAGC GGGGCGGTGCCTGGCAAACCCTGGCCCTGGGAGGCGTCGGGGCGGGCGGCAAGAGTTTCTTTGCGGTGCGTCTGTTCGACGTCGTGCACGGCAATACGCC TGGCGCCTTGTGGGAAATCGGCGCTCCTCCCGAGCCGGACCGCAATCATCCTTTCAATGACTTGGGGTATGCCTATGCCCGCCCACAGGTAGCGCGCTTG GCCGATGGTCGCTGGGCGGCTTTCGTCGGCAATGGCTACGGCAGCCATTCCGGGGTGGCAGCGCTGTATGTGGTGGACCTGAATGATGGCTCGCTGATTC GCGAGATCGCCATTGACGACCAGCCTGACAATGGCCTGTCGTCCGTCACCCTCAAGGTCAATGCACGCAATGAGGTGCAGGCGGCCTATGCGGGCGACCT CAAGGGGCGACTGTGGAAATTCGAGCTGTCCGGCAACGATAGCGCCAGCTGGCATCTGGCATTTGCCGGGCAGCCCTTGTTCCGCACCGCCGGTGGCGCC AGCCAGCCGATCAGCGCACCGCCGCGCCTGCTCGATCATCCCCGTGGTGGCCAATTGGTGCTGTTCGGTACGGGCAAGCTCAACGAGACCCGGGACAAGC AAAGCCGGGCGCGCCAGGGATTCTATGGCGTGTGGGACGCCGAGGGCGGTCCTGGGGGCATAAGCGAAAGTCAGTTGCAGGTGCAGCACCTTGAGGCCGG GTTCAGCGCGGCGGCCGGCAGTTTCCTGCGCAGCACCCTCAACGAGGTGCGTTATCCGGCGCAGCGCGGCTGGTACCTGCCCCTGGTACAAGGTGGCCTG GCAGCCGGCGAGCGGGTGCTCAACGAGGCGACCCTGGTGGCCGGCAGGGTGGTGTTCAGCACCCTGCAACTGGAGCCCGACGACCCTTGTTCGAGTGCCG GCAGTGGGAAATTGATCGAGCTGGAGGCGTTCAGCGGTAAGATGCTCGACGCTGCGGTGCTCGACACCAATGGCGACGGGGTCGTGGATGACCAGGACCA GCCCTCCAGCGGCGTGCGCTACGTCGGCACCGTGCCCAGCCTCGGCGGAGTTGCCAGCAATGGCGCCCGCAAGATCATCAGTGACTCCAGGGGGGGCATC AGCACCCTGGTGGAAAGGCCCGGTGGTGGCAGCCGGCGCATCCTGTGGCGACAAATCCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGAGATTCTTGACCATGCGCAGATCCAACCAAGGTTTTACCCTGATCGAAATCATGATCGTGATTGCGATCATCGGTCTGGTCCTTACCTTGAGCCTTC CCAGCATCACCGAATACGTGAAAAAACCGCACCGCAGCGAAATCGCGGTACTGCTTACCGAGCAGGCGCAGCAGCTTGAACGGCATTTCTCCAAGGCCGG GGTCTACAGCAATGCCCCGGACCTGAGCGCCGGCAATGAGTACTACAGCATTGCCGCAACCCTGACCGACACCGGCTTCTCCCTGACCGCGACCCCGAAG GACGATGGGCTGATGGCGGCGGACAAGTGCGGCAGTTTCAGCATCGACCAGACCGGCGCGACCCGCATCAGCGGCCAGGCCGAAGGGCTGACCGCCAAGG ATTGCTGGGGGCGCTGAGCACCTGTTTCGGGCCGCGGCGCCCACTGTCTTTCTCATGATTGGATCGGACTATGGCTAAGCAACAGCAAGTGCTGGTGGTG
Amino Acid Sequence
>pilus assembly protein
MPSIDRGIRRPGWRSLGALLLSLLPVPLAMAFNPASTPLLGAAAVAPNVMLVLDDSLGMNSIVHAREFDPLLARAAVWRCAGVGGECARGERLAGQAIAL SSLGESGCRAGFHSFHDPERGVRCLKLPDPVGAGNTLYSADYLSWLLAQAKGRERDFTDGSIPNDYRMNVARRLATALVTRYRWLRLGLATFNPPAPGDP GPGGYIARPISDLSAIEGAVSPAQAEANYQALLATINGLKAGGRTPLAETYYEITRYLRGMVPYYNLSPALYSSPIQYRCQKNYGVVISAGAADHDTQFP LNDPLGAGRLPNWDGIGNDGSERDGQTLYLDDLAKFAFDIDLRGPGVDEAGKSWAAVDFPRQYLNTFTVGFQAHNPLLMGAADYGQGEYFQARSNLERVL AGVLGEGIASVVTAGSGVLDAASGRYYQSQYDPLDWHGTIRAYGIDNQGRVAVDSPLWSSDSGVEGAGAEAIHETWNTASRRPVSLAYGNLSTAQRGELE QSLPAGVSGAELLDWSQGRSVSGLRERRYQLGDIVNSPLVLATAGQRSAVDGADGGDYSRYLAQKATAMATRLLVNSNDGLFNVLDPARGERLYGYMPSS ALGALAQIADPGYRRGERHRYLVDGPLAVFDGQRGGAWQTLALGGVGAGGKSFFAVRLFDVVHGNTPGALWEIGAPPEPDRNHPFNDLGYAYARPQVARL ADGRWAAFVGNGYGSHSGVAALYVVDLNDGSLIREIAIDDQPDNGLSSVTLKVNARNEVQAAYAGDLKGRLWKFELSGNDSASWHLAFAGQPLFRTAGGA SQPISAPPRLLDHPRGGQLVLFGTGKLNETRDKQSRARQGFYGVWDAEGGPGGISESQLQVQHLEAGFSAAAGSFLRSTLNEVRYPAQRGWYLPLVQGGL AAGERVLNEATLVAGRVVFSTLQLEPDDPCSSAGSGKLIELEAFSGKMLDAAVLDTNGDGVVDDQDQPSSGVRYVGTVPSLGGVASNGARKIISDSRGGI STLVERPGGGSRRILWRQIQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site