Pseudomonas fluorescens AU20219, AA067_RS04285

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU20219 Contig_5, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCAAGCTGGCGGTATTCGATGTCGACGGCGTGCTGACTGACGGACGCCTGTACTTCCTCGAAGACGGCAGCGAGTTCAAGACCTTCAACACCCTAGACGG CCAGGGCATCAAGATGCTCATGGCCGCCGGCGTGCAGACGGCGATCATCAGCGGGCGCAAGACCCCGGTGGTAGAGCGCCGGGCCAAGAACCTGGGGATT CCCCACCTGTACCAGGGCCGCGAAGACAAGCTGGCGGTATTGGACGAGCTTCTTGGCCAACTGGGCCTAAGCTATGAACAGGTCGCCTATCTGGGCGACG ATTTGCCCGACCTGCCGGTGATCCGCCGCGTGGGGCTGGGCATGGCGGTGGCCAATGCCGCAGCGTTTGTCCGCGAACACGCCCACGGCGTCACCGTGGC CCGCGGCGGTGAAGGTGCCGCCCGCGAGTTCTGCGAACTGATCCTGCGTGCCCAGGACCGCCTTGAAGCAGCCAATGCCGCTTACTTATAGAGCCTTCCC
DNA Sequence for Gene
>AA067_RS04285
ATGCTGAGCAAAAAGATTCGCAACATCCTGATCTTCGGGACCATCGCCCTGCTGTTCGCAGCGGTCGGTTACTGGAACATCAGCCCGGAACGCTTCCTCG ACAAGCCGGTGGCCCAGGTCGACGAAAGCGCCATCGACTACTACGTGATCAACGCCCGCAGCGTGCAGTACCTGCCCGACGGCAAACTGCAGTACGAAAT GACCTCGGACAAGGTCGAGCACGTCAAGGCCAGCGAAGTGACCCTGCTGACCAAGCCGGACCTGCAGATGTACCGTGGCACCACGTTCCCCTGGCATGTC CAGAGCGAACGCGGCGAGGTCAACCCGGACGGCACTGAGGTCGAGCTGATCGACTCGGTACGGGTTTCCCGCACCGACGAGCGCAACCGCAACCTGCTGA TCACCACGACCCGCATGACAGTATTCCCGCAGAAGCAATATGCGCAGACCGAGCAAGCCGTTAGAATCGACGGCGCCGACGGCGTGACTACGGCCAAGGG AATGAAAGCGTATTTGAAAGACGGCAGGATGAACCTGCTATCGAACGTAAGAGGACAGTATGAGGCTCGTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACCCTCCCTATTTTGCTCAGTCTGGGCGCAGCACTGGGAAGCGTGAGCGCCTGGGCTCTGCCGAACGATAGCCAACAGCCGATCCGCATCCAGGCCGAC GACGCCCAGCTGGACGACAAGAACGGCGTGGCCACCTACAAGGGCGATGTCATCATCACCCAGGGTTCGATGAAGATCACCGGCAACACCGTGACCATCA CCCGGTCCAAGACCGGTGAAATCGACGTGGTGACCTCGGTGGGCAACCTCGCCTACTTCGAGCAGCTGCAGAAGCAGACCGACCCGAAACCGGTCCAGGC CTACGCCGTGACCATCCAGTACCATGCCCAGCAGAACCGCATCGTGCTGATCGACAAGGCCAAGGTCATCAACGACGGCAACACCACCGAAGGCGAGAAG ATCGTCTACGACACCGTCAAGCAGGTTGCCAACGCCGGTCGCGCCAATGGCAGCTCGGTTACCGCGCCGCGTCCGCGGATCGACATGGTCATCCAGCCGA
Amino Acid Sequence
>LPS ABC transporter permease
MLSKKIRNILIFGTIALLFAAVGYWNISPERFLDKPVAQVDESAIDYYVINARSVQYLPDGKLQYEMTSDKVEHVKASEVTLLTKPDLQMYRGTTFPWHV QSERGEVNPDGTEVELIDSVRVSRTDERNRNLLITTTRMTVFPQKQYAQTEQAVRIDGADGVTTAKGMKAYLKDGRMNLLSNVRGQYEAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site