Pseudomonas fluorescens AU20219, AA067_RS01630

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU20219 Contig_40, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGCGCATCGCGCCGCTGATCTATGGCGGCTCCTTCCGCCGCGACCCGAGCCTGGCAGCCGAACACGCAGCCAAGGTGCGCTCGGCCGGCAAGCTCGGCTA TTACTGGCAGCTGTTCGCGGGCCTGGGCTGGACCAGCATTCACTGGCTGCACAAGATCCATCAGCCGACCCTGGTGCTGGCCGGCGATGACGACCCGCTG ATTCCCCTGATCAACATGCGCATGCTGGCCTGGCGCATACCCAATGCCCAGTTGCACATCATCGATGATGGCCACCTGTTCCTGATCACCCGGGCCGAGG CCGTCGCCCCGATCATCATGAAGTTCCTCCAGGAAGAACGCCAAAGGGCGGTGATGCACCCGCATCCCGAACCTGTGCGCCCTACCAAGTAAAAGATACC TGTCGACAGGATCGTCGCGCGCAAGAAGGGCCAGGACCGACTATGTTGTCTGTCTTGGATTGGTCTGCTTGTTAGTGGTTTGACGAAGGAGTGTTGACTC
DNA Sequence for Gene
>AA067_RS01630
ATGCAAGACAAACCTGCGACGGGCTCATTGCCGTCACCCGCCGCGTATATCAATGCGCAGAGCGCGATCACCGGCCTGCGCGGCCGGGACCTGTTCTCCA CCTTGCGCAGCCTGGCGGCCCATAGCCTGCGCAATCCGTTGCACAGTGCCCGGCATACCCTGGCCCTGGGCGGCCAGCTGGGGCGCGTGCTGCTGGGGGA AACCCTGCACAAGACCAACCCCAAGGACAACCGCTTCGCCGACCCGGCCTGGAGCCTAAACCCCTTCTACCGGCGCGGCCTGCAGGCGTACCTGAGCTGG CAGAAGCAGGTGCGCCACTGGATCGACGACAGTGGCATGAGCGAGGACGACCGGGCCCGGGCACACTTTGCCTTTTCCCTGCTCAATGATGCCGTTGCGC CTTCCAATACCCTGCTCAACCCCCTGGCCCTCAAGGAGATCTTCAACACCGGGGGCAACAGCGTGGTGCGGGGCATCGGCAACCTGCTGGATGACCTGCT GCACAACAACGGGTTGCCCAGCCAGGTGACCAAGCACGCCTTCGAGGTGGGCAAGAACCTCGCGGTCACCCCGGGCTCAGTGGTGTTTCGCAATGAATTG CTGGAACTGATCCAGTACAGCCCCATGAGCGAAAAACAGTACGCCAAGCCATTGCTGATCGTGCCGCCGCAAATCAACAAGTACTACATTTTCGACCTGA GCCCGACCAACAGCTTCGTCCAGTACGCGCTGAAAAACGGCCTGCAGGTGTTCATGGTCAGCTGGCGCAACCCGGATGTGCGGCACCGCGAGTGGGGTCT GTCGACCTACGTCGAGGCGGCCGAAGAAGCGCTGAACGTCACCCGGGCGATTACCGGCAGTCGCGAAGTCAACCTGGTGGGAGCCTGTGCCGGAGGGCTG ACCATCGCCGCCCTTCAAGGCCATCTGCAGGCCAAGCGCCAGCTGCGCCGGGTGTCCAGCGCGACCTACCTGGTAAGCCTGCTGGACAGCCAGATGGACA GCCCGGCAACGCTGTTCGCCGACGAGAAGACCCTCGAAGCGGCCAAGCGTCGCTCTTATCAGCAAGGGGTACTGGACGGTCGCGATATGGCCAAGGTGTT CGCCTGGATGCGCCCCAACGACCTGATCTGGAACTACTGGGTCAACAACTACCTGCTGGGCAAGGAGCCGCCGGTCTTCGACATTCTCTACTGGAACAAC GACAGCACCCGGTTGCCGGCCGCGCTGCACGGCGATCTGCTGGACTTCTTCAAGCACAACCCCCTGAGCCATGTCGGCGGGCTGGAAGTTTGCGGCACGC CGATCGACCTGCAGAAGGTCACGGTGGACAGCTTCAGCGTGGCCGGGATCAACGACCACATCACGCCCTGGGACGCGGTCTACCGCTCGACCCTGCTGCT GGGCGGCGAACGGCGCTTCGTGCTGTCCAACAGCGGCCACGTGCAGAGCATCCTCAACCCGCCGAGCAATCCCAAGGCCAACTACGTGGAGAACCGCAAG CTCAGCAGCGACCCGCGGGCCTGGTACTACGATGCCAAGCACGTGGACGGCAGCTGGTGGAGCCAGTGGCTGACCTGGGTCCAGGAGCGTTCGGGGGCGC AGCGCGAAACCCTCACCACCCTGGGCAACCAGAACTATCCACCGATGGAGGCTGCGCCAGGCACCTACGTGCGCGTGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGACACTTTGCACCACGGTTCCACACCGGAGCCGTGCCCCTTCAATGGACCGACAAGAAGTCAGGATGAAGACCCGCGACCGGATACTCGAATGTGCCCT GCAACTGTTCAACCAAAAGGGCGAGCCCAATGTCTCCACCATGGAGGTGGCCAATGAGATGGGGATCAGCCCCGGCAACCTCTACTACCACTTCCACGGC AAGGAGCCACTGGTGCTCGGCCTGTTCGAGCGCTTTCAGAACGAACTGACGCCGTTGCTGGATCCACCGTCCGACGTCCAGCTGGCGGCGGAAGACTACT GGCTGTTCCTGCACCTGATCGTCGAACGCCTGGCCCACTACCGCTTTCTGTTTCAGGACCTGTCCAACCTGGCCGGGCGCCTGCCAAAACTGGCCAAGGG CATTCGCAACCTGCTCAATGCCTTGAAACGCACCCTGGCCTCCTTGCTGGCCCGGCTCAAGGCTCAGGGGCAACTGGTCAGCGGCACCCAGGCCCTGGGG
Amino Acid Sequence
>poly(R)-hydroxyalkanoic acid synthase
MQDKPATGSLPSPAAYINAQSAITGLRGRDLFSTLRSLAAHSLRNPLHSARHTLALGGQLGRVLLGETLHKTNPKDNRFADPAWSLNPFYRRGLQAYLSW QKQVRHWIDDSGMSEDDRARAHFAFSLLNDAVAPSNTLLNPLALKEIFNTGGNSVVRGIGNLLDDLLHNNGLPSQVTKHAFEVGKNLAVTPGSVVFRNEL LELIQYSPMSEKQYAKPLLIVPPQINKYYIFDLSPTNSFVQYALKNGLQVFMVSWRNPDVRHREWGLSTYVEAAEEALNVTRAITGSREVNLVGACAGGL TIAALQGHLQAKRQLRRVSSATYLVSLLDSQMDSPATLFADEKTLEAAKRRSYQQGVLDGRDMAKVFAWMRPNDLIWNYWVNNYLLGKEPPVFDILYWNN DSTRLPAALHGDLLDFFKHNPLSHVGGLEVCGTPIDLQKVTVDSFSVAGINDHITPWDAVYRSTLLLGGERRFVLSNSGHVQSILNPPSNPKANYVENRK LSSDPRAWYYDAKHVDGSWWSQWLTWVQERSGAQRETLTTLGNQNYPPMEAAPGTYVRVR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site