Pseudomonas fluorescens AU20219, AA067_RS08430
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU20219 Contig_36, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCGAAGATCGTCATCAAGGTGCCGTTGACCCTGGCGATCATGCCGACCCTGATGGTCATGCTGGGCAACCAGGCATTCGCTTTCCCGCTGGTCAACGTCA ACGAGATCTTCCACCTCGACCTGTCGCGCACCAACGTGGTGGACGGCCAGGAAGTGGTGATCGTGCGCGACAAGGCGTTGCCCCTGTTCTACCTCAAACG CTGGCTGGTCAGTTCCGCCGCTCATGAAGAGCAGCGCGAGGGCCACGTAGTGATCCTTTCGGTGGGCACCCAGCGGATCGGCTTTGTCGTCGATCAACTG GTGGGCCAGGAAGAAGTGGTCATCAAGCCCTTGGGCAAAATGCTTCAGGGAACCCCGGGCATGTCCGGCGCCACCATTACCGGTGACGGCCGCATTGCTC TGATCCTCGATGTTCCGAGCATGCTCAAGCGTTACGCCGCACGGCGTATTTGATTCGGCGGGGAGGGGCGGTTGGCCTCGCCCCACCTAACGGAGTGTTT
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| DNA Sequence for Gene |
>AA067_RS08430
ATGGCAGTCAAAGTCCTGGTGGTGGACGATTCGGGTTTTTTCCGCCGCCGCGTCTCGGAAATTCTTTCAGCGGATTCGAATATCCAGGTCGTCGGCACGG CGACCAATGGTAAAGAGGCGATCGATCAGGCCCTGGCGCTCAAGCCGGACGTGATCACCATGGACTACGAGATGCCGATGATGGATGGCATCACCGCAGT GCGGCACATCATGCAGCGCTGCCCGACGCCGGTCCTGATGTTCTCCTCCCTGACCCACGAAGGCGCCCGAGTGACCCTCGATGCGCTGGATGCGGGGGCG GTGGACTTTCTGCCGAAGAACTTCGAGGACATCTCGCGCAATCCCGAGAAGGTCAAGCAGTTGCTGTGCGAGAAGGTCCACAGTATCTCGCGCAGCAATC GGCGCTTCAGCAGCTACAGTGCTCCGGCGCCGCAGCCGGCGAGTGCGCCGGCACCTGCTCCTTCGAGCTTCGCCAGCTCGCGCTCGCCAGCTCCCGCACC GGCTCCGGCGCGCGCAGCGGCGCCGGCGGCCAGTGCGAATTCGCCGGCGCCCAAGCGCAAGGCCTACAAGCTGGTGGCCATTGGTACGTCCACAGGCGGC CCGGTGGCGCTGCAGCGGGTCCTGACCCAGTTGCCGGCCAACTTCCCGGCCCCCATCGTCTTGATCCAGCACATGCCTGCGGCCTTCACCAAGGCCTTTG CCGAGCGTCTGGACAAGCTCTGCCGCATCAGTGTCAAGGAAGCCGAGGATGGCGACATCCTGCGTCCGGGCCTGGCGCTGCTGGCGCCTGGCGGCAAGCA GATGATGGTCGACGGTCGCGGTGCGGTGAAGATTCTTCCGGGCGATGAGCGCTTGAACTACAAGCCGTGCGTGGATATCACCTTCGGCTCTGCGGCCAAG TCCTACAGTGACAAAGTTCTGGCGGTGGTGCTCACCGGCATGGGCGCCGACGGTCGCGAAGGCGCGCGTCTGCTCAAGCAGGGCGGCAGTGCAGTCTGGG CCCAGGACGAGGCCAGCTGCGTGATCTATGGCATGCCCATGGCCATCGTCAAGGCCAACCTGGCGGATGCGGTGTACAGCCTGGACGACATCGGCCGGCA CCTGGTCGAGGCCTGTCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGGATGTGCTCAGCCTTATCGGGATCATCATGGCGTTTGTCGCCATCATCGGTGGCAACTACCTGGAGGGGGGGCACCTGTCGGCCCTGGCCAATGGTCC GGCGGCACTGATCGTGCTCGGCGGGACCATCGGCGCGGCGCTGCTGCAGTCGCCGCTGAGCGCCTTCAAGCGGGCCATGCAGATCCTTGCCTGGATCCTG TTCCCGCCCCGGGTCGACCTGCCGGGCGGCATCGACCGGGTGGTCAACTGGAGCCTCACCGCGCGCAAGGAAGGCCTGCTGGGCCTGGAAGGCGTGGCGG ATGCCGAGCCTGACAGCTATGCGCGCAAGGGCTTGCAGTTGCTGGTGGACGGTGCCGAACCCGAAGCCATCCGCAGCATTCTCGAAGTGGATTTCTATAC CCAGGAAAGCCGTGATATCGAGGCCGCCAAGGTGTTCGAGAGTATGGGCGGCTATGCGCCGACCATCGGCATCATCGGCGCGGTAATGGGCCTGATCCAC
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| Amino Acid Sequence |
>transcriptional regulator
MAVKVLVVDDSGFFRRRVSEILSADSNIQVVGTATNGKEAIDQALALKPDVITMDYEMPMMDGITAVRHIMQRCPTPVLMFSSLTHEGARVTLDALDAGA VDFLPKNFEDISRNPEKVKQLLCEKVHSISRSNRRFSSYSAPAPQPASAPAPAPSSFASSRSPAPAPAPARAAAPAASANSPAPKRKAYKLVAIGTSTGG PVALQRVLTQLPANFPAPIVLIQHMPAAFTKAFAERLDKLCRISVKEAEDGDILRPGLALLAPGGKQMMVDGRGAVKILPGDERLNYKPCVDITFGSAAK SYSDKVLAVVLTGMGADGREGARLLKQGGSAVWAQDEASCVIYGMPMAIVKANLADAVYSLDDIGRHLVEACL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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