Pseudomonas fluorescens AU20219, AA067_RS27520

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU20219 Contig_10, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GATCCAGCAGATCGCGCCGCCGCGCACCCTCTACGAAGAGCCGAAGAACACCTTCGTCGCCAACTTCATCGGCGAGAACAACCGCCTCAACGGCCGCCTG CACAGCCATAACGGCGAGCGCTGCGTGGTGGAGCTGGGGCGTGGCGAGAAGGTCGAGGCGCTGGCAGTGAATGTGGGCCAGGTCGGCGGCCCGGTGACCT TGTCCATCCGCCCGGAGCGGGTGAGCCTCAACGGTTCCAGCGAAAGCTGCGTCAACCGCTTCTCCGGCCGGGTGGCGGAATTCATCTATCTGGGCGACCA CGTCCGGGTGCGCCTGGAAGTCTGCGGCAAAAGCGACTTCTTCGTGAAACAGCCGATTGCCGAGCTCGATCCTGCGCTGGCGGTGGGTGACGTGGTGCCG CTTGGCTGGCAAGTCGAGCACGTTCGCGCGCTTGACCCGCTTCTAGAGGCGAATTGATCGCCCCCCTGCAACACCAACCTGCACGTGGAGAACACAATAA
DNA Sequence for Gene
>AA067_RS27520
ATGTTGAGATCCCTGAAATTCACCGCCCTGGCATTGGGCATGCTGGGTGCGGCGCACGCCATGGCGGCGGGGCCGGACCTGACCGTAGTGTCCTTTGGCG GGGCGAACAAGGCGGCACAGGTCAAGGCCTTCTATGCCCCTTGGGAAGCGGCCGGCAAGGGCAAGATCATCGCCGGTGAATACAACGGCGAGATGGCCAA GATCAAAGCCATGGTCGACACCAAGAGCGTGTCCTGGGACCTGGTGGAAGTGGAGTCCCCGGAACTGTCCCGCGGTTGCGACGAGGACATGTTCGAGCAA CTGGACCCGGCGCTGTTCGGCAAGAGCGAAGACTACGTCAAGGGCGCTATCCAACCGTGCGGCGTGGGCTTCTTCGTCTGGTCCACGGTCCTGGCCTACA ACGCCGACAAGCTGAAAACCGCTCCGAGCAGTTGGGCTGATTTCTGGGACGTCAAGCAGTTCCCGGGCAAGCGCGGCCTGCGCAAGGGCGCCAAGTACAC CCTGGAATTCGCCTTGATGGCCGACGGCGTCGCGCCCAAGGACGTGTACAAGGTCCTGGCCGGCAAGGATGGCCAGGACCGCGCCTTCAAGAAACTCGAT GAGCTCAAGCCTTACATCCAGTGGTGGGAAGCCGGCGCCCAGCCGCCGCAGTACCTGGCCTCCGGCGACGTGGTCATGAGTTCGGCCTACAACGGTCGGA TCGCTGCGGTGCAGAAGGAAAGCAACCTGAAAGTGGTATGGAACGGCGGCATCTACGACTTCGACGCCTGGGCCATTCCCAAAGGCCTGGACAAGGCTCG CGCCGAAGCGGCGAAGAAATTCATCGCCTACTCGGTACAGCCGCAGCAGCAGAAGACCTATTCGGAGAATATCGCCTACGGTCCGGCCAACACCCAGGCC GTGCCGCTGCTGGCCAAGGACATCCTCAAGGACATGCCGACCACTCCGGAAAACATCGCCAACCAGGTGCAGATCGACGTCAGCTTCTGGGCTGACAACG GTGAGCAACTGGAACAGCGCTTCAACGCCTGGGCAGCCAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCACCCCCAGCCGTTGTAGGAGCGAGCTTGCCCGCGAAGGCGTCATGCGCATCAACCTTGATGTTGAAGCACACCCTTCGATGCGCGGCCAAGCCCGCTC CTGCCACCCGGTGGTTTGTATTCGAAAGATCGATTCGCGGAGTTTGTCATGACCATCACCGTTCCCCTGAACGCGGTCACCGGCCCGACCCTCAAGCAGC GGCTGGCCCGTGCCGAGCGGGTCAACCGCTGGAAGGCCCAGGCGCTGATCGCGCCCCTGGTGCTGTTTCTGTTGCTGGTGTTCCTGGTACCGATCGTGGC GCTGCTGTACAAGAGCGTCGGCAACCCGGAAGTGGTCGGCGGTATGCCGCGTACGGTGGCGGCCGTGAGTGCCTGGGACGGTCGTGGCCTGCCCGCTGAA GGGGCCTACAAGGCCTTGAGCGAAGACCTGGCGGACGCCCGCAAGAATCAGACCCTGGGCGACCTGTCCAAGCGCCTGAACATGGAGTTGGCCGGCTACC
Amino Acid Sequence
>spermidine/putrescine ABC transporter substrate-binding protein
MLRSLKFTALALGMLGAAHAMAAGPDLTVVSFGGANKAAQVKAFYAPWEAAGKGKIIAGEYNGEMAKIKAMVDTKSVSWDLVEVESPELSRGCDEDMFEQ LDPALFGKSEDYVKGAIQPCGVGFFVWSTVLAYNADKLKTAPSSWADFWDVKQFPGKRGLRKGAKYTLEFALMADGVAPKDVYKVLAGKDGQDRAFKKLD ELKPYIQWWEAGAQPPQYLASGDVVMSSAYNGRIAAVQKESNLKVVWNGGIYDFDAWAIPKGLDKARAEAAKKFIAYSVQPQQQKTYSENIAYGPANTQA VPLLAKDILKDMPTTPENIANQVQIDVSFWADNGEQLEQRFNAWAAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site