Strain | Pseudomonas fluorescens strain AU11114 Contig_9, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGTTGCGCACGACTTTGACTTCGGCACCCAGCTCGCCGAGGTATTGCACAACGTTGTAAGTAAAGGAGTCGTAGTTGTCGATCATCAGCAACATGGCGTT TCGAACCTCTTGAATTCTGACTTGAAGACAGCCTTCAGATGACTTGCCCGCAGGGCGCTGCACGATGTCGGACGCACAGGGGCGTCGGCAAAGCGGCAAT TCAAACGAGCAAGGAAGGCAAAGCGATACAGATCCGGCCGAGCCGGCAGAAAAGATTCAGGCGCGCCAACGCCAACGGGCGTGTGCCTTGATGACTTGAT CCAGAAGTTTGCTGGTGATCAACACGGGGAAGGTCTCGTTCATACGTTCGGGCACAGTAACTTAGCTGGGCGGAGCGTGCAATATGGCCGGGGCTTTGGT GGATAAATCCGGGGGAGGAATCGCGACCGATGGCAAAAGGCCGGAAGTTTTTGGTACTGTCGTTTTGTTCACCTACAACAATAAATAAACGGACTTGCTC
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DNA Sequence for Gene |
>AA065_RS24975
ATGATCAAACAGACGTTGTTTGTACCGATGGCCAGCTGCTTGCTCGCATTAGCCTGCGCCCAAGCGAATGCCGCGCCCAATCCTTATTCGAATTTCATTG TTTTCGGCGACAGCCTCAATGACGCCGGCACGTTTAGCGACAGCGGCGGCCCGGACGGCGCCACTCAGCGCTTCACCAACCGTACCGGCCCGGTGTATCT GGATGGCAGCGGCGAATTGCGCTCGCTCAACGCGACGCAGATCCTCGGCGGCAAACTGGGGTTCTCGCCGGATCAGACAGCGTCCTCGTCATCGGCAGTA CGCGCGAACGAAGGCCTGGCCGACGGTAACAACTGGGCGGTAGGCGGCTATCGTACCGACCAGATTCTTGATTCGATCACCACGCAATCCGCCACCGGCG AACGCACTCGCGCCGGTTACCTGCCGTCGAACGGCTTTCGCGCCGATCCGAATGCGCTGTATTACCTGTCGGGGGGCGGCAATGACTTCCTTCAGGGACG CGTGACCAGCCTGCCTCAGGCCAGCGCTGCGGCGGATCGTCTGGCGAGCAGTGCGCAAACCCTGCAACAAGCCGGCGCCCGTTACATCATGGTATGGCTG CTGCCGGACATCGGCTTCACCCCGGCCTTCAATGGCTCTCCCCTGCAAGCGTTCACGTCCCAGCTCAGCAGTCAGTTCAACACCGAACTGGTCAGCCAGT TGCAGCGCGTCAACGCTAACGTGATTCCGCTGAACATTCCGGTGCTGCTCAAAGAGTCGTTTGCCAACCCGGGCCAGTTCGGTCTGGCCACCGACCAGAA TCTCAGTGCCACCTGCTTCAGCGGTAGCGGCTGCACCGAGAATACCCGGTACGGGATCAACAGTGCGACGCCAGACCCGACCAAGCTCATCTACAACGAT GCAGTTCACCCCACCGAAGCTGGCCAGCGCCTGATCGCCGATTACGCTTACTCGTTGCTGGCTGCACCGTGGGAAGCGACCCTGTTGCCAGAGATGGCGC AAGGCACCCTGCGCTCGCATCAGGATGAACTGCGCAACCAGTGGCTGGCCGACTGGGAAAACTGGCAAGGCGTTGGCCAATTGCGCGCGATTGTCGCTGG CGGCGGCCAACATCAGGACTTCGACAGCCAGGACAGCGGCGCCAGCGCCGACGGCAATGGCTACAACCTGAACATCGGTGGCAGCTACCGCCTCAACGAC GCCTGGCGCGTTGGCCTGGCGGCCGGGTTCTACAACCAGAAACTCGAAGCTGGCGAGCACGATTCCGACTACAAGCTGAACACCTACATGGGCACCGCTT TCGCCCAGTACCAGCAGAATCGCTGGTGGGGTGACGCGGCCGTGACCGCCGGCCACCTGGATTACGACAGCCTCAAGCGTAAATTCCAGTTGGGGACGAA CGAGCGCGGCGAGAAAGGCGACACCGACGGTTATGTCCTGGCTTTCAGCGGACGCGTGGGTTACGACATCGCGCCAGAGGCGAGCAGCCCATGGCACCTG TCACCCTTCGTGAGTGCTGATTTCGCCAAGGTCGAGGTCGACGGCTATTCGGAGGACGGCGCTGACTCCACCGCGCTGACATTCGATGATCAGTCGCGCA TCTCCCGGCGTCTCGGTCTGGGGATTCAGGGCAAATACCAGATCACTTCGCAAACTCAGGTGTTCGGCGAATTGGCTCACGAACGTGAGTACAACGATGA CGCTCAGGATGTGACGATGAATCTCAACAGCCTGCCGGGCAACCAGTACACCCTGGAAGGCTATACCCCGCAGACCGACCTCAATCGCTTGAACCTGGGC GTGAGCCACAACCTCACCAAAGACCTGGCGCTGCGTGCCAGCTACAACGTCCGCAAGGATGATGACTTTACCCAGCAAGGGATCAACGTCGGGGTGAGTC TGGACTTCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATCGCAGGCACAAAAAAGCGGCGCCCTCACAGGCGCCGCTTTTTTTTATGGCTGAACACAAAACCCATGTGGGAGCGAACCTGCTCGCGAAGCGGTGTAT CAGCCAACCTCTATAGCGCCTGACACGCCCTCTTCGCGAGCAGGCTCGCTCCCACAGGGAATTGCGTGAATCAGACGTCCGGGGTTTGTTCAGCCAGGGC CACCGCGCGGAACATCGCGCGGCGTTTGTTCAGGGTTTCTTCCCATTCAAGCGCCGGCACCGAATCGGCGACGATGCCGCCACCGGCCTGCACGTGCAGC TCGCCGTTCTTGATCACGGCGGTGCGAATCGCAATCGCGGTGTCCATGTTGCCGTTCCACGCGAAGTAACCGACCGCGCCGCCATACACGCCACGCTTGA CAGGCTCCAGCTCGTCGATGATTTCCATCGCACGAATCTTCGGCGCACCGGACAGGGTGCCCGCCGGCAGAATCGCTCGTAGAGCGTCCATCGCCGTCAG
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Amino Acid Sequence |
>esterase
MIKQTLFVPMASCLLALACAQANAAPNPYSNFIVFGDSLNDAGTFSDSGGPDGATQRFTNRTGPVYLDGSGELRSLNATQILGGKLGFSPDQTASSSSAV RANEGLADGNNWAVGGYRTDQILDSITTQSATGERTRAGYLPSNGFRADPNALYYLSGGGNDFLQGRVTSLPQASAAADRLASSAQTLQQAGARYIMVWL LPDIGFTPAFNGSPLQAFTSQLSSQFNTELVSQLQRVNANVIPLNIPVLLKESFANPGQFGLATDQNLSATCFSGSGCTENTRYGINSATPDPTKLIYND AVHPTEAGQRLIADYAYSLLAAPWEATLLPEMAQGTLRSHQDELRNQWLADWENWQGVGQLRAIVAGGGQHQDFDSQDSGASADGNGYNLNIGGSYRLND AWRVGLAAGFYNQKLEAGEHDSDYKLNTYMGTAFAQYQQNRWWGDAAVTAGHLDYDSLKRKFQLGTNERGEKGDTDGYVLAFSGRVGYDIAPEASSPWHL SPFVSADFAKVEVDGYSEDGADSTALTFDDQSRISRRLGLGIQGKYQITSQTQVFGELAHEREYNDDAQDVTMNLNSLPGNQYTLEGYTPQTDLNRLNLG VSHNLTKDLALRASYNVRKDDDFTQQGINVGVSLDF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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