Pseudomonas fluorescens AU11114, AA065_RS03175

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU11114 Contig_67, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCCAACAGCAACAGTTACTCCATCGAATACAAGGAGTTCGGCATTCGTTTGACGCTGACGCCGACCGTGGTCAGCAACAACCGCATCGCGCTCAAAGTCG CCCCTGAAGTCAGCGAGCTGGACTACAACAATGGCGTGACCATCGGCGGCACCAAAGTGCCGGCGTTCAACATCCGCCGCACCGACACCAGCATCTCTCT GGCCGACGGTGAAAGCTTTGTGATCAGCGGGTTGATCAGCACGCGCAACGCCTCTGAAGTGAATAAATTTCCCGGCCTTGGCGACATCCCGGTCCTGGGC GCATTTTTCCGCAACTCGTCGATCAATCGCGAAGAGCGCGAGTTGCTGATGATCGTCACCCCGCACCTGGTGCAGCCACTGGCTGCCAATGCACCGCTGC CTTCGCTGCCGGGGGAGAAACTGCGCAACTACGACCCGAACTGGTATCGCCTGTACTTCCTCGAAAACGGCAACTTCGATAAACGCAGCGGATTATCGCA
DNA Sequence for Gene
>AA065_RS03175
ATGAGCCAGAACCTGAGTCAGACCTTCCTCGCCATCACCCGCAACGACACCGACCTTGAATGGCTGCAAGGCGCGCTGGCGCCACTCGGTCAGGTGGTCA GCGCCGGTGGCGGCAGCCTTGACGAGTTGCTGGCGCTGGTCGATGTGACCTTCGCCAGCCTGGTGTTCGTGGGACTTGATCGTGATCATCTGGTGGCGCA AAGCGCCCTGATCGAAGGAGTGCTGGAAGCCAAGCCGATGCTCGCCATCGTCGCCCTCGGTGACGGCATGGACAATCAGTTGGTGCTCAACGCAATGCGC GCCGGCGCGCGGGATTTTGTCGCCTACGGTTCACGCTCCAGCGAAGTTGCCGGGCTGGTGCGACGCCTGAGCAAACGTCTGCCGGCGGTGACGCCGAGCA CTCAGCTCGGTGGTTTGACGGTGCTCTACGGCGTACAAAGCAACGCCGACGGCGCACTGCTCGCCAACCACATGGCGCTGGTGGTGCAGAAGAGCGGCCA GCAAACCCTGCTGCTCGATCTGGGCCTGCCGCGCGGCGACAGTCTGGCCTTGCTCGGGCTTGAGAGTTCGTTCCATTTCGGCGACGCGCTGCGCCACTTG CGGCGGCTCGATACGACCCTGATCGACAGCGCCTTCACCAGCGCCGAAGCGGGCCTGCGCATTCTTGCCTACGCCAACGGCGACGAGCCGCTGGAGCGCA CCAGCGCCGCCGAGTTGTACATGTTGCTCAGCGCCTTGCGCCAGCACTTCCAGCACATCGTGGTCAACCTCACCGGTCAGCCCGACAGCGAAGCGCTGCG CACCTTCGTCAGCCATTGCGACAAGCTGATCTGGTACACCGACCAGAACGTTCTCGACTGTCGGCGCAACCTCGCGGTGCTCAATCTGTGGCGCGAAAAA GGCATGAAACTCGACCATGGCCGGTTGCTGGTGGATCGCTACCTGCGCAACGTCGCGCCGGATTCCGACACCCTCGGCAAGACCTTCGGCCTGGAGGTCA TCGCGGTGCTCGCCTACAGCCCGGAGATTCGTCTAAACGCAAAAAACCAGGGCGTCAGCCTGTTCGAACTGGCCCCGCGTGAGGCCATCAGCCAGAGCCT GCGTACCCTCGGCGAACGCCTGGCGAAACGCTCCGAAGGCCTGGCCAAACCCAAAGTCAGCTGGTTCGACCGCTTGCGAGGCACCTCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACGGCGAGCAATTGTTCGGCGGGTCGCAGCGCCCCGCGTCCGGCAACACCGATCACGATGGCCTGAAACTGGTGCTGCACCGTTACATCATCGACGCCAT CGAAGAGTCGGGGAAAAACCTGCTGGAAGGCTCGCGGCAGGTGCTTTCGCAATTCGTCATCGACAAGGTCGCCGAATACATCGCACGCCTGCATCTGGCG ATTTCCCGTTATGAGATGGAGCGCCTGGCCGAAGAAATCGTCGATGAGCTGACCGGTTTCGGCCCGCTGGAAGTGCTGCTGCGCGACAGCGCGGTGACCG AAATTCTGGTCAACGGCCCGCACCGGGTGTTCATCGAACGCGACGGCGTGCTGCACCTGAGCGACCTGCGCTTTATTGATGCGCACCACGTTGAACGAGT GATGCAGCGCATTCTCGGGCCACTCGGTCGGCGTCTCGATGAGTCGTCGCCGATGGTCGATGCACGCCTGCCCGATGGCAGTCGGGTCAACGCCATCATC
Amino Acid Sequence
>pilus assembly protein
MSQNLSQTFLAITRNDTDLEWLQGALAPLGQVVSAGGGSLDELLALVDVTFASLVFVGLDRDHLVAQSALIEGVLEAKPMLAIVALGDGMDNQLVLNAMR AGARDFVAYGSRSSEVAGLVRRLSKRLPAVTPSTQLGGLTVLYGVQSNADGALLANHMALVVQKSGQQTLLLDLGLPRGDSLALLGLESSFHFGDALRHL RRLDTTLIDSAFTSAEAGLRILAYANGDEPLERTSAAELYMLLSALRQHFQHIVVNLTGQPDSEALRTFVSHCDKLIWYTDQNVLDCRRNLAVLNLWREK GMKLDHGRLLVDRYLRNVAPDSDTLGKTFGLEVIAVLAYSPEIRLNAKNQGVSLFELAPREAISQSLRTLGERLAKRSEGLAKPKVSWFDRLRGTS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site