Pseudomonas fluorescens AU11114, AA065_RS23630
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU11114 Contig_66, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCGACTTGCCACACGATGCAGCGTTCTTCATTGCCCAGCGCATTCGCTCCAACGTCCGTGAGCTGGAAGGCGCGCTGAAACGCGTGATTGCCCATTCGCA CTTCATGGGTCGCGACATCACCATCGAGCTGATTCGCGAATCCCTGAAAGACCTGTTGGCGTTGCAAGACAAGCTGGTCTCTGTGGATAACATTCAGCGT ACCGTCGCCGAGTACTACAAGATCAAGATTTCCGATCTGCTGTCCAAGCGCCGTTCGCGCTCGGTGGCACGTCCGCGTCAGGTCGCCATGGCGCTGTCCA AAGAACTGACCAACCACAGCCTGCCGGAAATCGGTGATGTGTTTGGCGGCCGCGACCACACGACTGTTTTGCACGCCTGCCGCAAGATCAACGAACTTAA GGAATCCGACGCGGACATCCGCGAGGACTACAAGAACCTGCTGCGTACACTGACCACTTGATGAACACCAGCGCAGCTTATTAAGGCAAGGGACTAGACC
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| DNA Sequence for Gene |
>AA065_RS23630
ATGCATTTCACCATTCAACGCGAAGCCCTGTTGAAACCCCTGCAACTGGTCGCAGGCGTCGTTGAGCGCCGACAGACCTTGCCGGTACTCTCTAACGTGC TGCTGGTTGTCGAAGGCCAGCAATTGTCGCTGACCGGTACCGACCTGGAAGTCGAGCTGGTTGGTCGTGTGCAACTCGAAGAGCCGGCTGAAACAGGTTC CATCACCGTGCCTGCGCGCAAACTGATGGATATCTGCAAGAGCCTGCCCAACGATGCGCTGATCGATATCAAGGTCGACGAGCAGAAGCTGGTGGTGAAG GCCGGTCGTAGCCGCTTCACCCTGTCGACCCTGCCCGCCAATGATTTCCCGACTGTGGAAGAAGGCCCGGGCTCGCTGACCTGCAGCCTGGAGCAGAGCA GACTGCGTCGTTTGATCGAACGCACCAGCTTCGCCATGGCCCAACAGGACGTGCGCTACTACCTCAACGGTATGCTGCTGGAAGTCTCGGAAGGCATCAT TCGCGCAGTGGCCACCGATGGTCACCGTCTGGCGATGTGCTCGATGAAGGCCGATATCGGTCAGCCGGATCGTCATCAGGTGATCGTGCCGCGCAAAGGC ATTCTCGAACTGGCGCGTCTGCTCACCGAGCCGGACGGCATTGTCAGCATCGTCTTGGGTCAGCATCACATTCGCGCCACCACGGGTGAATTCACCTTCA CCTCGAAACTGGTCGACGGCAAGTTCCCCGACTACGAGCGCGTTCTGCCGAAGGGCGGCGACAAGCTGGTGCTTGGCGATCGTCAGGCACTGCGTGAAGC GTTCAGCCGTACCGCGATTCTGTCCAACGAGAAATACCGCGGTATCCGTCTGCAACTGGCCAGTGGTCAGTTGAAGATCCAGGCCAACAACCCGGAGCAG GAAGAAGCGGAAGAGGAAGTGGGCGTTGAATACAACGGCGGCTCTCTGGAGATCGGCTTCAACGTGAGCTATTTGCTCGATGTGCTGGGCGTGATGACCA CCGAGCAGGTTCGTCTGATTCTGTCCGACTCCAACAGCAGTGCGCTGGTGCAAGAGTCCGATAACGACGATTCGGCTTACGTTGTCATGCCGATGCGCCT GTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACAGCTGATCCTGGATGTCCTTAAGTCGTGTTTCGGTCACCGCGGTGCGTAATCTGCACCCGGTGACCTTCTCTCCCTCCCCTCGCATCAACATCCTTTA CGGCGCCAACGGCAGCGGCAAAACCAGTGTTCTGGAAGCCATTCACCTGCTGGGGCTTGCCCGTTCGTTTCGCAGCACGCGGCTATTACCAGTCATCCAG TACGAGCAACTCGCCTGCACGGTGTTTGGGCAGGTCGAACTGGCCGAGGGTGGCCACAGCGCTTTGGGAATTTCACGCGACCGTCAGGGCGAGTTCCAGA TCCGCATCGACGGCCAGAATGCCCGTAGCGCCGCGCAACTTGCAGAAATCCTTCCGCTGCAGCTGATCAACCCGGACAGCTTCCGCTTGTTGGAAGGTGC GCCGAAGATTCGCCGACAGTTTCTCGATTGGGGCGTGTTCCACGTCGAGCCTCGGTTCATGTCCACTTGGCAGCGCTTGCAGAAGGCCCTGCGCCAGAGA
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| Amino Acid Sequence |
>DNA polymerase III subunit beta
MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVQLEEPAETGSITVPARKLMDICKSLPNDALIDIKVDEQKLVVK AGRSRFTLSTLPANDFPTVEEGPGSLTCSLEQSRLRRLIERTSFAMAQQDVRYYLNGMLLEVSEGIIRAVATDGHRLAMCSMKADIGQPDRHQVIVPRKG ILELARLLTEPDGIVSIVLGQHHIRATTGEFTFTSKLVDGKFPDYERVLPKGGDKLVLGDRQALREAFSRTAILSNEKYRGIRLQLASGQLKIQANNPEQ EEAEEEVGVEYNGGSLEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSALVQESDNDDSAYVVMPMRL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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