Pseudomonas fluorescens AU11114, AA065_RS23625
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU11114 Contig_66, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAGAAAGCAAGGCTTCAGGTCAATTTCCAACCAACGTTTCCTTATAAATAGATCTCAGGACCTTATTTGGCTGAAACCCTGTTCGCCATACATAAAAATA AAGAAGGGAATTATTTAAAGCTTTTCTGTAAAGCTTATAAAAGCTAGGGCCACGATCTTCTGTGGATAACTGCCTTGAGGCCATGTTTAACCTGATGTAC AGAGAATGACAACTACAGTGGAAAACCGTGGTCAGCCTGTGCTGCACTGTCGGATAACCTGTGTGTGGAATGGGCTGTTATCCACAGGCAGGTTATCCAC CGAGTTTAACCCCCACTTGTCCAATGCCCTTAGAGGCGGTTATCCACAGAGCTTATTCACACACCGTTGGTCGCCTTTTTTCCGTTTAACGCATTGATAA ATCATGGACGGGGGGCAACCTGCATGTGGATAAGTGGACAGCTCGCCGCTACAATGGCCGCTTGTTTTTGCCTCACCGGCTTTCAACTTAGGGGATATCC
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| DNA Sequence for Gene |
>AA065_RS23625
GTGTCAGTGGAACTTTGGCAGCAGTGCGTGGAGCTTTTGCGCGAGGAGCTGCCTGCCCAACAATTCAACACCTGGATCCGTCCACTACAGGTCGAAGCCG AAGGCGACGAGTTGCGCGTCTACGCACCGAACCGTTTTGTACTGGACTGGGTCAACGAAAAGTACCTTGGGCGCGTCCTCGAACTGCTGGATGAGCACGG CAACGGTATGGCGCCGGCGCTTTCCTTATTAATAGGCAGCAAACGTAGTTCGGCACCGCGTGCGGCCCCGAATGCCCCGTTAGCCGCCGCGCAAGCGTCT TTGGCCCATGCCAACAACGCACCGGCAAGCCAGCAGGCGCCGGCCGCAGCGCCAACTCAGGCCAAACGTTCGACGCAGAAAACTGTGGAAGTCAGCGAAG AGCCTTCTCGCGACAGCTTCGACCCGATGGCCGGTGCCGCGTCGCAGCAGGCTCCAGTTCGCGCCGAACAGCGCACTGTGCAGGTCGAAGGTGCGCTCAA GCACACCAGTTACCTGAACCGCACGTTCACCTTCGAAAACTTCGTCGAAGGTAAGTCCAACCAACTCGCCCGCGCGGCGGCCTGGCAAGTGGCGGACAAC CCAAAGCATGGCTACAACCCACTCTTCCTATATGGTGGCGTTGGCTTGGGTAAAACTCACTTGATGCACGCGGTGGGTAACCATCTATTAAAGAAGAACC CGAATGCCAAGGTCGTGTACCTGCATTCCGAGCGTTTCGTGGCCGACATGGTCAAGGCGCTGCAACTGAACGCCATCAACGAGTTCAAGCGCTTCTACCG TTCGGTGGATGCTTTGCTGATCGACGATATTCAGTTCTTCGCCCGCAAGGAACGTTCCCAGGAAGAGTTTTTCCACACCTTCAATGCCCTGCTTGAAGGT GGCCAGCAGGTCATTCTCACCAGTGACCGCTATCCGAAAGAAATCGAAGGCCTTGAAGAACGCCTGAAATCCCGTTTTGGCTGGGGCCTGACCGTTGCCG TCGAGCCGCCGGAACTGGAAACCCGCGTAGCAATCCTGATGAAGAAGGCCGACCAGGCCAAAGTCGACTTGCCACACGATGCAGCGTTCTTCATTGCCCA GCGCATTCGCTCCAACGTCCGTGAGCTGGAAGGCGCGCTGAAACGCGTGATTGCCCATTCGCACTTCATGGGTCGCGACATCACCATCGAGCTGATTCGC GAATCCCTGAAAGACCTGTTGGCGTTGCAAGACAAGCTGGTCTCTGTGGATAACATTCAGCGTACCGTCGCCGAGTACTACAAGATCAAGATTTCCGATC TGCTGTCCAAGCGCCGTTCGCGCTCGGTGGCACGTCCGCGTCAGGTCGCCATGGCGCTGTCCAAAGAACTGACCAACCACAGCCTGCCGGAAATCGGTGA TGTGTTTGGCGGCCGCGACCACACGACTGTTTTGCACGCCTGCCGCAAGATCAACGAACTTAAGGAATCCGACGCGGACATCCGCGAGGACTACAAGAAC CTGCTGCGTACACTGACCACTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGAACACCAGCGCAGCTTATTAAGGCAAGGGACTAGACCATGCATTTCACCATTCAACGCGAAGCCCTGTTGAAACCCCTGCAACTGGTCGCAGGCGTCG TTGAGCGCCGACAGACCTTGCCGGTACTCTCTAACGTGCTGCTGGTTGTCGAAGGCCAGCAATTGTCGCTGACCGGTACCGACCTGGAAGTCGAGCTGGT TGGTCGTGTGCAACTCGAAGAGCCGGCTGAAACAGGTTCCATCACCGTGCCTGCGCGCAAACTGATGGATATCTGCAAGAGCCTGCCCAACGATGCGCTG ATCGATATCAAGGTCGACGAGCAGAAGCTGGTGGTGAAGGCCGGTCGTAGCCGCTTCACCCTGTCGACCCTGCCCGCCAATGATTTCCCGACTGTGGAAG AAGGCCCGGGCTCGCTGACCTGCAGCCTGGAGCAGAGCAGACTGCGTCGTTTGATCGAACGCACCAGCTTCGCCATGGCCCAACAGGACGTGCGCTACTA
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| Amino Acid Sequence |
>chromosomal replication initiator protein DnaA
MSVELWQQCVELLREELPAQQFNTWIRPLQVEAEGDELRVYAPNRFVLDWVNEKYLGRVLELLDEHGNGMAPALSLLIGSKRSSAPRAAPNAPLAAAQAS LAHANNAPASQQAPAAAPTQAKRSTQKTVEVSEEPSRDSFDPMAGAASQQAPVRAEQRTVQVEGALKHTSYLNRTFTFENFVEGKSNQLARAAAWQVADN PKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHSERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFARKERSQEEFFHTFNALLEG GQQVILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVDLPHDAAFFIAQRIRSNVRELEGALKRVIAHSHFMGRDITIELIR ESLKDLLALQDKLVSVDNIQRTVAEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDVFGGRDHTTVLHACRKINELKESDADIREDYKN LLRTLTT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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