Pseudomonas fluorescens AU11114, AA065_RS24225
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU11114 Contig_64, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGGCGGCGACGTGGTGGTGATTGATGAGCCAGCGCGTCAGGCGTTGTTGGCGTTCAACTGGCCGGGGAATGTGCGGCAGTTGCGTAATGTTCTGCGCACG CTGGCGGCGTTGTGTGATGAGGGGCGGATCGGTCTGGAGGATTTGCCGGCGATGATTCGCCAGGCACGGCCACAGGTGTTGGAGGTTTGCTCATCCGAAC ATCCGCTGGAGGATGCCGAGCGGTTGGCGTTGCTGAATGCCCTGGAACAGCAACGCTGGCATATGACGCAGACGGCGCAGCAGCTTGGGGTCAGTCGCAA TACCCTCTATAGAAAGCTGCGTAAACACGGGATTGCCCGCTAAACCGCGCCGCACCGTTCGCGAGCAGGCTCGCTCCCACAGGGTTAGCGCCAACCTTGT GGGAGCGAGCCTGCTCGCGAAGGCGTCGGCAAAGGCGAAACACAAGGTGCGATTTCCCCCTCCCTACGCTAACCTGCGGCCATGTTTTACGAGGTCGACT
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| DNA Sequence for Gene |
>AA065_RS24225
ATGCACATTCATATTCTGGGTATCTGCGGGACTTTCATGGGCTCGATGGCGGTTCTGGCCAAAGAGCTGGGCCATCACGTGACCGGCTCCGACGCCAACG TCTATCCGCCGATGAGCACGCAGCTCGAGGCCCAAGGCATTCAGCTGACGCAGGGCTACGATCCGGCTCAGCTCGATCCGGCACCGGATCTGGTGGTGAT CGGTAACGCCATGTCGCGCGGTAATCCGGCGGTGGAATATGTGCTGAACAAAGGCCTGCCGTACGTCTCTGGCCCGCAGTGGCTGGCTGATCACGTGCTG CAAGGTCGCTGGGTACTGGCCGTTGCCGGCACCCACGGCAAAACCACCACCAGCAGCATGCTCGCCTGGGTGCTGGAGCACGCCGGCATGAGCCCGGGTT TCCTGATCGGGGGCGTGCCGCAGAACTTCTCGGTGTCCGCACGTTTGGGCGGTACGCCGTTTTTCGTGATCGAGGCCGACGAGTACGACAGCGCTTTCTT CGACAAGCGTTCGAAGTTCGTGCACTACCGCCCCCGCACCGCGATCCTCAACAATCTTGAGTTCGATCACGCAGACATCTTCCCCGATTTGCCGGCCATC GAACGGCAATTCCACCATTTGGTGCGCACCATCCCGAGCGAAGGCCTGGTGATCCATCCGACCACCGAGCCTGCCTTGCAGCGGGTAATCGAGATGGGCT GCTGGACCCCGGTGCAAACCACCGGTGCTGGCGGTCAGTGGCAGGTCAAATTGCTCAGCGAAGACGGCTCGGCCTTTGAAGTGATGTTCGAAGGTGTGTC CCAGGGCACGGTCGAGTGGGAATTGACTGGCCAGCACAACGTCGCCAACGCCCTGGCTGCGCTGGCGGCTGCGCGTCATGTGGGGGTGGTGCCGTCGATG GGCATCGCCGGGTTGAGCGCGTTCAAGAACGTCAAGCGTCGGATGGAAAAAGTCGCGGAAGTGCGCGGCATCACCATCTACGACGATTTCGCCCATCACC CGACGGCGATCGCCACCACGCTTGATGGCCTGCGCAAGCGCATCGGTGATGCACCGTTGATCGCGATCATCGAGCCACGCTCCAACTCGATGAAACTCGG CGCGCACCGTGACGGTTTGCCGGACAGCGTCAACGATGCCGATCAGGTGATCTGGTACGCCCCGGCCAACCTTGGCTGGGATCTGGCCGCCACCGCTGCG CTGTGCAAGGTGCCGTCGATTGTCAGCGATACGCTGGAAGGCATCATCGAACGCGTGAAAAGCCAGGCTCAGCCCGGCACTCACGTGGTGATCATGAGCA ATGGCGGCTTCGGCGGCCTGCACGGCAAACTCGCCGAGGCGCTGCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACACTTTTGCGCAGAACGGCGGCCCGGAGCGCATCACGCTGGCGATGACCGGTGCATCGGGCGCGCAGTACGGTTTGCGCCTGCTCGATTGTCTGGTGCG GGAAGATCGCGAGGTGCACTTCCTGATCTCCAAAGCCGCGCAACTGGTGATGGCCACCGAAACCGACGTCTCGCTGCCGCCCAAACCGCAGATGATGCAG GCGTTCCTGACCGAATACACCGGGGCCGCCGCCGGGCAGATCCGCGTGTACGGCAAGGAAGACTGGATGTCGCCGGTGGCCTCGGGCTCTGGCGCGCCAG CGGCGATGGTGGTTGTGCCGTGCTCGACCGGGACGCTGTCGGCCATCGCGACGGGTGCCTGCAACAACCTGATCGAACGCGCAGCCGACGTCACCTTGAA GGAGCGTCGCCAGTTGATTCTGGTGCCGCGCGAGGCGCCGTATTCAAGCATTCATCTGGAGCACATGCTCAAACTGTCGAACATGGGCGTGACGATTCTG
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| Amino Acid Sequence |
>UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
MHIHILGICGTFMGSMAVLAKELGHHVTGSDANVYPPMSTQLEAQGIQLTQGYDPAQLDPAPDLVVIGNAMSRGNPAVEYVLNKGLPYVSGPQWLADHVL QGRWVLAVAGTHGKTTTSSMLAWVLEHAGMSPGFLIGGVPQNFSVSARLGGTPFFVIEADEYDSAFFDKRSKFVHYRPRTAILNNLEFDHADIFPDLPAI ERQFHHLVRTIPSEGLVIHPTTEPALQRVIEMGCWTPVQTTGAGGQWQVKLLSEDGSAFEVMFEGVSQGTVEWELTGQHNVANALAALAAARHVGVVPSM GIAGLSAFKNVKRRMEKVAEVRGITIYDDFAHHPTAIATTLDGLRKRIGDAPLIAIIEPRSNSMKLGAHRDGLPDSVNDADQVIWYAPANLGWDLAATAA LCKVPSIVSDTLEGIIERVKSQAQPGTHVVIMSNGGFGGLHGKLAEALQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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