Pseudomonas fluorescens AU11114, AA065_RS24030
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU11114 Contig_64, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCGAGGCCGAGGCGCTGCGCAATCTGTGCGAACGCTACAAGACGCAGCTAATCATCAACGACGACGCCGAACTGGCCGCGCGCCTGAACGTCGGTGTAC ACCTGGGCCAGACCGACGGCCCGCTGTCACCGACCCGCGCCCTGCTCGGCTCGAAATCGATCATCGGCTCGACTTGCCACGCGCAAATCGAACTGGCGCA ACAGGCTGCCAAGGAAGGCGCGAGTTACGTCGCCTTCGGTCGTTTCTTCAATTCCAACACAAAACCCGGTGCACCGACCTGCAGCCTTGATCTGCTCGAC GAAGCCAAACGTGCGCTGCATCTACCGATATGCGCGATTGGTGGCATTACCCTCGACAACGCTGCGCCGCTGGTGGCCCACGGCGTCGACTTGCTTGCTG TGGTCCACGGTTTGTTTGGTGCCGACAGCACCGCCGAAGTGACCCGCCGCGCCCGCGCATTCAATGAATTGTTCAAATCCTGATTTTTGAGAGCCCGATC
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| DNA Sequence for Gene |
>AA065_RS24030
ATGTCTCGTTCCGAAACCCTGTTTGCCAATGCCCAGAAACACATTCCCGGTGGCGTGAACTCACCGGTTCGCGCGTTCAAGAGCGTGGGTGGCACGCCGC TGTTCTTCAAACATGCCGAAGGCGCCTACGTCACTGACGAAGACGACAAGCGTTATGTCGATTACGTTGGCTCGTGGGGCCCGATGATTCTTGGCCACAG CCACCCGGACGTGCTGGACGCGGTGCGCAATCAACTGCAGCACGGCTTGTCGTACGGTGCGCCGACCGCGATGGAAACCGAGATGGCCGACCTGGTCTGC TCGCTGGTGCCGTCGATGGACATGGTGCGCATGGTCAGCTCCGGCACCGAAGCGACCATGAGCGCCATCCGCCTGGCCCGTGGTTTCACCGGCCGCGACA GCATCATCAAATTCGAAGGCTGCTACCACGGCCACTCCGACAGTCTGCTGGTCAAGGCCGGTTCCGGCGCACTGACCCAAGGCGTTCCGAGCTCGGCGGG TGTACCGGCCGCGTTCGCCAAACACACGCTGACCCTGCCGTTCAACGACATCGACGCCGTGGAAAAAATGCTCGCCGAAGTCGGTGAAGAAGTCGCCTGC ATCATCGTTGAGCCAGTGGCCGGCAACATGAACTGCGTACCGCCAGCACCTGGCTTCCTCGAAGGTCTGCGCTCGCTGTGCGACAAGCATGGCGTTGTGC TGATTTTCGACGAAGTGATGACCGGTTTCCGCGTGGCCCTCGGTGGGGCGCAGGCTTACTACGGCGTGAAACCAGACCTGACCACCTTCGGCAAAATCAT CGGTGGCGGCATGCCGGTCGGCTGTTTCGGCGGCAAGCGCGAAATCATGGAACGCATCGCGCCACTGGGCCCGGTGTATCAGGCCGGTACGCTGTCGGGT AACCCGCTGGCCATGGCCGCGGGCCTGACGACGCTGCGCCTGATCAGCCGTCCGGGTTTCCACGACGAACTGACCGATTACACCACGCGCTTGCTCGACG GCCTGCAACAACGCGCTGACGCAGCGGGCATTCCGTTCGTGACCACTCAGGCCGGCGGCATGTTCGGCCTGTACTTCAGCGGTGCCGACGACATCGTCAC CTTTGAAGACGTGATGGCCAGTGACGCTGCCCTGTTCGGTCGCTTCTTCCACCTGATGCTGGAAGGCGGCGTGTACCTGGCGCCGAGTGCATTCGAAGCC GGTTTCACTTCTATCGCCCACGGCGAAGCCGAGTTGAAGTTGACTCTGGATGCAGCCGAGCGCGCCTTCGCCAAACTGAAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGCCGAACCGCTGACGTTGGCCATTGCCAGCGTCAGCTTTCACCTACACCCGAGCTGTTTTTCCGACGCCTCTGCTAAATATCCGCCTGAAGTGGGCGA TATATTCCCCGCGCAGCAGAAAAACGAGTAAAGACTTTGTAAGGATGGCCCTGCTTATTTCATAATGCGCGCTTATTGGATCCCTCGATGGGTCCGCGTG CCCTTCAGAGGTAAGTCGATTCCCATGAACCGCACCGGCCGCACCCTTGCCTTGGGCTGCCTGTTGCTCCTTCAGCCCCTGCTCGCGCATGCACAAGCAG GCGGCAACTCGTTGTTGATCCCGGCGATGGGTCGTTGCACCCTCAATACTCAGCCGCAAGACGTCACGCAGGCACTGGCCGCCTGCCAAAAGGCAGCGGA TGAAGGGGATGCGCAAGCGCAATACGAGTTGGGTGAGTTCTACTACGACGGCAAGAATGCGCCGCGCGACCTCAATCAAGCCCTGAGCTATTTCGAAAAA
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| Amino Acid Sequence |
>glutamate-1-semialdehyde 2,1-aminomutase
MSRSETLFANAQKHIPGGVNSPVRAFKSVGGTPLFFKHAEGAYVTDEDDKRYVDYVGSWGPMILGHSHPDVLDAVRNQLQHGLSYGAPTAMETEMADLVC SLVPSMDMVRMVSSGTEATMSAIRLARGFTGRDSIIKFEGCYHGHSDSLLVKAGSGALTQGVPSSAGVPAAFAKHTLTLPFNDIDAVEKMLAEVGEEVAC IIVEPVAGNMNCVPPAPGFLEGLRSLCDKHGVVLIFDEVMTGFRVALGGAQAYYGVKPDLTTFGKIIGGGMPVGCFGGKREIMERIAPLGPVYQAGTLSG NPLAMAAGLTTLRLISRPGFHDELTDYTTRLLDGLQQRADAAGIPFVTTQAGGMFGLYFSGADDIVTFEDVMASDAALFGRFFHLMLEGGVYLAPSAFEA GFTSIAHGEAELKLTLDAAERAFAKLK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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