Pseudomonas fluorescens AU11114, AA065_RS25845
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU11114 Contig_62, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AACGCCGCCATTCAGGCGTCGATGGCCGGGGATGCCGGGCGCGGATTTGCCGTGGTCGCCGACGAAGTGCAGCGCTTGGCCGAGCGTTCATCTGCCGCTA CACGCCAGATCGAAACCCTGGTGCGGGCGATTCAGACCGACACCAACGAAGCCGTCATTTCGATGGAACAGACCACCACCGAAGTGGTGCGCGGCGCGCG ACTGGCGCAGGATGCCGGTGTGGCACTGGAAGAAATCGAAGGCGTATCCAAGACGCTTGCGGCGCTGATTCAAAGCATCTCCAACGCGGCGCAACAGCAG ACGTCTTCGGCGGGGCAGATTTCCCTGACCATGAACGTGATCCAGCAGATCACCTCGCAGACGTCGTCCGGCTCCACGGCCACCGCCGAAAGCATCGGCA ACCTGGCGAAAATGGCCAGTCAGTTGCGCCGTTCGGTGTCCGGTTTCACCTTGCCGGCGGCGTCCGCGTCGGCGACGGATAAAGTGTGATTGGAGCGGTT
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| DNA Sequence for Gene |
>AA065_RS25845
ATGGGTGATCGGCACGATTACGTGGCCCTCGAATGGGTCAAGGGCGAAATTGCCGAAACGCTGAAACAGGCGCATCAGGCGATCGAAGCCGTGCTCGATG ATCCGCAGGCCTTTCCCGGGCTCGACGAGTGCCTGAGTTACATCCATCAGGTCCACGGCAGTTTGCAGATGGTCGAGTTCTACGGCGCGGCGTTGCTCGC CGAAGAAATGGAACATCTGGTCGAGGCCCTCCAGCACGAGCGCGTCAGCCATCGCGACGAAGCCCTGCACCTGCTGTTACAAGCCTTGGGGCAACTACCG ATTTACCTTGAGCGTGTGCAAAGCGCCCGTCGCGATCTGCCGCTGGTGGTCTTGCCGTTGATCAATGATTTGCGCAGCGCCCGCGGCGAAAGCCTGCTCT CGGAAACCAGCCTGTTCAGCCCGCAACTGCCGGAACTGGCGCCGCTGAGTGAAGAGGCGCTGGCGCTGCTGGAACCGGCCGAACTGCCGAGCGTTCTGCG CAAGTTGCGCCAGACGCTGCAAATGGCGCTGGTCGGGTTGCTGCGTGAACAGGATGATCACACTCACCTCGATTATCTGGCCAAGGTCTTCAGCCGTCTC CAGGCGCTAAGCGGCGATGCGCCGTTGAGTCCGTTGTGGCAAGTTGCATCGGCATTGGTCGAAGGCATGCGTGAGGGTGTGATCGCCAACAGCCCGGCGC TACGCAGCCTGTTCAAGGATGCCGACAAAGAGCTCAAGCGCCTGCTCGAACAAGGCCTGCAAGGGCTCAATCAGCCGCCGCCTGCGGAGCTGCTCAAAAG CCTGTTGTTCTATATCGCCAAAGCCGAAAATCCCACCGGGCAGATGCTGACCATGAAAGATCGCTACTCGCTGGATGATGCTCTGCCCGACAGCGCGATG GTCGACGAAGAGCGCGCGCGCCTGGCCGGTCCCGACCGCGATGCGATGCGCTCGGTGCTCGCGGCACTGTGCGAAGAACTGGTGCGGGTCAAGGAGCGGC TCGACCTGTTCGTGCGCAGCGACCGCCAACATACGTCCGATCTGGAAAGTCTGCTGGCACCACTGCGGCAGATCGCCGATACCCTGGCCGTGCTCGGTTT CGGCCAGCCGCGCAAAGTCATCATCGACCAATTGGCGGTGGTCTTGAGCATCGCCCAAGGCCAGCGTGAACCGAACGACGCCGTCCTGATGGACGTCGCC GGTGCCTTGCTCTACGTCGAAGCGACCCTGGCCGGGATGGTCGGCACCGTCGAGCCGGAGAGCCCGGAAGATTCACGCCTGCCGACTACCGACCTCACGC AGATTCATCAGATTGTGATCAAGGAAGCACGCATCTGCCTGCAACAGGCCAAGGACATGATCGTCGACTACATCGACGCCGACTGGGACCGCCAGCAGCT GCAACCACTGCCTGCACTGCTGACTCAAGTGCGCGGTGCACTGGCGATGATTCCGCTTGCACGTGCGGCGAGTCTGGTCGAGGCCTGCAACGGTTTTATC CGCGAACATCTGTTGCTCGATCCGCATGAACCGGGTTGGGAGCAGTTGGACAACCTGGCCGATGTCATCAGCAGTCTTGAGTACTATCTGGAACGCTTGA CCGACGACCCGCTGGCGCCCGGCGAGCAACTGCTGGATATCGCACAGAAGAGTCTCGCCAGCCTCGGTTTCTTTCCCAGCGAGCAGCCCGGTGAGGTCCA TGTACCGGTGCTCGACGACGTGCTCAGTCCCAGCGAAGCACTGGTGATGCAGGACGCGCAGTCGCTGGATGATCCTGAAATTGTACAGTCGCTGGCCGAG GTCCTGGCCAGCCCGGTGTCGGTGCTCAACCCGCCCGCGCGCATCACGCCCGGCAGCCTGATGCCGCCACCGGCGGATGAAGAACCGGTGGATGACGAAC TGCGCGAAGTGTTCCTCGAAGAGACCGACGAGGTCCTCGAAGTCCTTCACGAATACTTGCCGCGCTGGTCGGCCAATCCGCAGGATCACGCCGCGCTGAC CGAACTGCGCCGCGCCTTCCACACCTTGAAAGGCAGCGGTCGCATGGTGCGTGCGCTGATTCTCGGCGAACTGGCGTGGGCCGTGGAAAACCTGCTCAAC CGCGTGCTGGAGCAAAGCGTCGAACCCGGCTCGGTGGTCCAGCAACTGCTGACCGATACGGTGTTGTTGCTGCCGGAGCTGATCAACGAATTCGCCACTC ATCGCCAGCGTCAGCGCAGCGATGTCGATCAACTCGCCGCGCGTGCCCATGCTTTGGCCAAGGGTGACGAACCACTGGCCGCCGAGGACGTTGATGACGT CGCGGCGCTCGATCCATTGTTGCTGGAGATCTTCCGCAACGAAGCCGAAACCCATCTCGCCAGCCTCAACCGCTTTCTCGATCAGGCCGCTGAACACGTG CCGCTGCAAGCCAGCGACGAATTGCAGCGCGCCTTGCACACGCTCAAGGGCAGTGCGTCGATGGCGGGTGTGTTGCCGATTGCCGAACTGGCCGCGCCGC TTGATCAGCTGGCCCGAGAGTTCAAGGCGCATCAACTGCCGCTCGACCTCGATGAAGTGGAATTGCTCCTCGAAGCCGAGGGCCTGTTCCGTGTCGGATT ACGTCAGCTCAAGCATGATCCGCTGGCGCCGATTGTCGGCGCGCAGTCACTGATCAAACGCACCGAAGCGCTGCTCGCCGAGCGTCTGGAATCGATCCTC AATGCGCCGAACACCGGCCTTCGGATCAAGCGTGATCCGCAACTGATCAACAACTTTCTTGCGCAAGGCATGGACATCCTGCTCGACGCCGAAAGCCTCT TGCAGCGCTGGCAGCAACACCCCGGCGAACGGCAGGAATTGAGCGCGCTGCTGGATGAACTGACCACCCTCGGCGAAGGCGCGCACCTGGCGGATCTGCT GCCGGTCGATGTGTTGTGCGAAGCCTTGCTCGATCTGTATGGCGCTGTGGAAGAAAGCAGCCTGGCGGTCAGCGACCGGTTCTTCCACGAAGCGCAGAAC GCCCACGAAGCGCTGATCAACATGCTCGACGAGCTGGCCGCCGGCCAGGAAGTCACGCCGCAGCCTGCGCGGATTCGTGCGTTGCACGACTTGCTCGATG AAAGTCTCGACCCCTCGTCCATGGGCCTGATCCGCAGCGACGGCAGCCGCACCTTGAGCATCCGCGAACTGGGCGCCGCGACCGCTGAGCTTGCACAATC CACGTCTATTCCCGCGCCGGACGACGAGATCGTCGACATCTTCCTCGAAGAGGCCGTGGACATTCTCGACAGCGCCGGGCAAGCCTTGCAGCGCTGGTTG AACGACCCGGACAACGCCGCGCCGCTGTCCTCGTTGCAGCGCGATTTACACACCCTCAAGGGCGGTGCGCGGATGGCTGAAGTCGAAGCCATTGGGGATC TGGCCCAAGAGTTGGAAAGCCTTTACGAAGGCCTGGTTGATCGGCGCCACAGCCACAGCGAAGCCCTCGGTCGCTTGCTGCACAAGAGCCATGAGCGTTT GGCGCTGCTGCTGGAACAGCTGCAAGACCATCAGCCGCTGAACCCGGCGCAGGATCTGATTGAGGCGATTCGGCAGTTTCGCCAAGGTTCGTCCGCCAGT GTCGAAACGGCGCAACCTGCCGTCGATTACGAAGGTGCCGTGCACGATCCGGAGTTGCTGGAAATCTTCCTCGAAGAAGGTTTCGACATCATCGAAAACT CCGGCGCCGCGCTGCTGCGTTGGCAGGCCGAACCGGGCAATCGCCAGGAAGTGGAAACCCTGCTGCGCGATCTGCACACCCTCAAAGGCGGCGCGCGGAT GGTCGAGATCGGCCCGATCGGCGACCTTGCCCATGAGCTGGAATACCTTTACGAAAGTCTCTCCGCCGGCACCTTACAAGCGTCGACCGAGTTGTTCGCA TTGGTCCAGCGCGGCCATGACCGACTGGCGCAAATGCTCGATGCCGTGCGCGCCGGGCAACCGTGCCCGCCGGCGGATCGGCTGATCAATGCGATTCGCA ATTTCAGTCATCCAGCGGCGCTGGAAACCCCGCCGCCGGTGCCGCTTGCGGTCAAGACCGAGACCGCGCCACCTGCCGTCGACGCCAGCGCTGACATGGT CAAGGTCTCCGCCGAACTGCTCGACGAACTGGTCAACCTGGCCGGGGAAACCTCGATTTTCCGCGGGCGTATCGAACAGCAAGTCAACGACGCGCAGATA GCGCTCAACGAGATGGAAACCACCATCGAGCGCATGCGCGATCAACTGCGTCGCCTCGACACCGAAACCCAGGGGCGGATTCTCAGCCGGCAGCAGGTCG ATGCCGAGCGCCTTGGCTATGAAGAATTCGATCCGCTGGAAATGGACCGTCATTCGCAGTTGCAGCAACTGTCGCGAGCGCTGTTCGAATCCGCCTCGGA CTTGCTCGACCTCAAGGAAACCCTCGACCGACGCAACCACGACGCCGAGAACCTGCTGCAACAACAGGGACGGATCAACACCGAATTGCAGGAAGGCCTG ATGCGTACGCGCATGGTGCCTTTCGAACGTCTGTTGCCGCGCCTCAAACGCATCGTCCGTCAGGTGGCTGAAGAGCTGAACAAGGACGTTGCGTTCGTCG TCGGCAATGCCGAAGGCGAGATGGACCGCAACGTCCTCGAGCGCATGGTCGCGCCGCTGGAACACATGCTGCGCAACGCCGTCGACCATGGTCTGGAATC TGCCGAGGTGCGCCAGGCCTGCGGGAAACCGACGCAAGGGCAGATCAGCCTCGACCTGTCGCGCGAGGGTGGCGACATCGTTTTCGACATTCGCGACGAT GGCGCGGGTGTGCCGCTGGAAGCCGTGCGGCGCAAGGCGATAAAGCGCGGCTTGCTGGCTCCCAACGCCGAGATCAGCGACCGCGATGTGTTGCAGTTCA TCCTTCAGCCGGGTTTTTCCACTGCCGAAAAAATAACCCAGATTTCCGGGCGTGGCGTCGGCATGGACGTGGTTCACGAGGAGGTCCGCCAACTGGGCGG CAGCATGAGCATCGACTCGGTGCCGGGGCAGGGCGTGCACTTCCGCATCCGTTTGCCGTTCACGGTGTCCGTCAATCGCGCGTTGATGGTGCAGTGCGCA GAGGATCAATACGCGATTCCGCTGAACACCATTGAAGGCATCGTCCGTGTCCTGCCGAATGACCTCGAAGGACATTTCCGTCTCGACCCGCCGAGCTATC AATACGGCGGCCAACGCTATGAGTTGTGCTATCTGGGCGAACTGCTGAAAACCGCGCCACGGCCGAAACTGCTCGGCCAGAATCTGCCATTGCCGGTGCT GCTGGTGCATTACAACGACCGGCACATTGCGGTGCAGGTTGATGCCATGGCGGGTACTCGCGAGATTGTGGTGAAGAGCCTCGGCGCGCAGTTCGCGGCG GTGCAGGGCGTGTCCGGCGCGACGATTCTCGGTGATGGTCGGGTTGTGTTGATTCTTGATTTGCTCGCGCCGATCCGCGCGATGCAGGCGCGCGTTACGC AGCATCCGACGCTCCCGGAAATCGACAGCGAGTCGCAGAAACCGCTGCTGGTGATGGTGGTCGACGACTCGGTGACGGTGCGCAAGGTCACCAGCCGTTT GCTTGAGCGACACGGCATGAACGTACTGACCGCCAAGGATGGCGTCGACGCCATGCTTCTGCTCGAAGAACACATGCCCGACCTGATGCTGCTCGACATC GAAATGCCGCGCATGGACGGTTTCGAAGTGGCGACCCAGGTACGCAACGACGAACGTCTGCAACACCTGCCGATCATCATGATCACCTCGCGCACCGGGC AGAAACACCGCGACCGCGCCATGGCCATCGGCGTCAACGACTACCTCGGCAAGCCGTACCAGGAATCGGTGCTGCTCGAAAGCATTGCCCACTGGAGCAA GAAACATGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGCCGGCACAACCCGCGCACCAGCCAACTTACCGGGCTGCTGCTGCCGCTGGCGGATCGCAATTTGATCCTGCCGAACGTGGCAGTCGCGGAGCTGATC GACTATCAGGCCAGCGCCTTTGATCTGGATACGCCGCCGTGGTATCTGGGGCGGGTGATGTGGCGTGAGCGGCAGATTCCGCTGTTGAGTTTTGAATCTG CCTGCGGGCAAAAAATCGTGATTGGCGAGCGGGCGCGAATCGTGATTCTCAATGCGCTGGGCGGGTTGCCGGAGCTCAAGTTCATTGCGCTGCTGGTGCA GGGGATTCCTCGGTCTTACAAACTCGACAGTCAGTTGAGTTACGTTGATGTGCCGTTGTGTGCGCTGGAGCAGGCAGCGGTGCAGGTGGGGGAGCAGGTG GCGAAGGTGCCGGATTTGTTGGGGTTGGAGAGGTTGTTGGTGGAGGCTGGCCTGGTCCATTAATCCAGCATTTGTGGTGTGTTGACTGACGCCTTCGCGA
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| Amino Acid Sequence |
>histidine kinase
MGDRHDYVALEWVKGEIAETLKQAHQAIEAVLDDPQAFPGLDECLSYIHQVHGSLQMVEFYGAALLAEEMEHLVEALQHERVSHRDEALHLLLQALGQLP IYLERVQSARRDLPLVVLPLINDLRSARGESLLSETSLFSPQLPELAPLSEEALALLEPAELPSVLRKLRQTLQMALVGLLREQDDHTHLDYLAKVFSRL QALSGDAPLSPLWQVASALVEGMREGVIANSPALRSLFKDADKELKRLLEQGLQGLNQPPPAELLKSLLFYIAKAENPTGQMLTMKDRYSLDDALPDSAM VDEERARLAGPDRDAMRSVLAALCEELVRVKERLDLFVRSDRQHTSDLESLLAPLRQIADTLAVLGFGQPRKVIIDQLAVVLSIAQGQREPNDAVLMDVA GALLYVEATLAGMVGTVEPESPEDSRLPTTDLTQIHQIVIKEARICLQQAKDMIVDYIDADWDRQQLQPLPALLTQVRGALAMIPLARAASLVEACNGFI REHLLLDPHEPGWEQLDNLADVISSLEYYLERLTDDPLAPGEQLLDIAQKSLASLGFFPSEQPGEVHVPVLDDVLSPSEALVMQDAQSLDDPEIVQSLAE VLASPVSVLNPPARITPGSLMPPPADEEPVDDELREVFLEETDEVLEVLHEYLPRWSANPQDHAALTELRRAFHTLKGSGRMVRALILGELAWAVENLLN RVLEQSVEPGSVVQQLLTDTVLLLPELINEFATHRQRQRSDVDQLAARAHALAKGDEPLAAEDVDDVAALDPLLLEIFRNEAETHLASLNRFLDQAAEHV PLQASDELQRALHTLKGSASMAGVLPIAELAAPLDQLAREFKAHQLPLDLDEVELLLEAEGLFRVGLRQLKHDPLAPIVGAQSLIKRTEALLAERLESIL NAPNTGLRIKRDPQLINNFLAQGMDILLDAESLLQRWQQHPGERQELSALLDELTTLGEGAHLADLLPVDVLCEALLDLYGAVEESSLAVSDRFFHEAQN AHEALINMLDELAAGQEVTPQPARIRALHDLLDESLDPSSMGLIRSDGSRTLSIRELGAATAELAQSTSIPAPDDEIVDIFLEEAVDILDSAGQALQRWL NDPDNAAPLSSLQRDLHTLKGGARMAEVEAIGDLAQELESLYEGLVDRRHSHSEALGRLLHKSHERLALLLEQLQDHQPLNPAQDLIEAIRQFRQGSSAS VETAQPAVDYEGAVHDPELLEIFLEEGFDIIENSGAALLRWQAEPGNRQEVETLLRDLHTLKGGARMVEIGPIGDLAHELEYLYESLSAGTLQASTELFA LVQRGHDRLAQMLDAVRAGQPCPPADRLINAIRNFSHPAALETPPPVPLAVKTETAPPAVDASADMVKVSAELLDELVNLAGETSIFRGRIEQQVNDAQI ALNEMETTIERMRDQLRRLDTETQGRILSRQQVDAERLGYEEFDPLEMDRHSQLQQLSRALFESASDLLDLKETLDRRNHDAENLLQQQGRINTELQEGL MRTRMVPFERLLPRLKRIVRQVAEELNKDVAFVVGNAEGEMDRNVLERMVAPLEHMLRNAVDHGLESAEVRQACGKPTQGQISLDLSREGGDIVFDIRDD GAGVPLEAVRRKAIKRGLLAPNAEISDRDVLQFILQPGFSTAEKITQISGRGVGMDVVHEEVRQLGGSMSIDSVPGQGVHFRIRLPFTVSVNRALMVQCA EDQYAIPLNTIEGIVRVLPNDLEGHFRLDPPSYQYGGQRYELCYLGELLKTAPRPKLLGQNLPLPVLLVHYNDRHIAVQVDAMAGTREIVVKSLGAQFAA VQGVSGATILGDGRVVLILDLLAPIRAMQARVTQHPTLPEIDSESQKPLLVMVVDDSVTVRKVTSRLLERHGMNVLTAKDGVDAMLLLEEHMPDLMLLDI EMPRMDGFEVATQVRNDERLQHLPIIMITSRTGQKHRDRAMAIGVNDYLGKPYQESVLLESIAHWSKKHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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