Pseudomonas fluorescens AU11114, AA065_RS18675

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU11114 Contig_6, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGCTGGAAAATGTCTGGCCGACGCTGAAACCGCTGCTTTGAGGCTTTTCTAGCGGCAGGCTTTCGGCTAATGTGGCGCCCCCTTAATCGGAGGCCCCGAT GTCGCGTTCTGCCTGGTCCCTTTTTGCCTATCAACTGATCGAGCCTGACGAGCAGCTGGATCTGTTCGCCTGCCAGGAAGTGCGGGTGCATCTGGTGACA CGTCAACTCGAACTCGGTGGCTCGGCCGATCGCACCTTGTGCGGCAGCCTGCTGCCGGCGCAACCGCGCTGGTCGAGCGTGGATCGCCGGGTCTTTCAGG ACCAGCGGCTGTGCTCGCTGTGCCGGGCGATCCTTGAGTCGCAGAAGCGCGGCACTTCGCCGATCTGGCCCGAGTTGCGTTTCGAGCTCTAAGATGAAAA GAGCGCAGGCACGGTCTATCGGCCTGTCTCCCCGAATATTCCAAGTGCGGTGTACAATCGCGCTGTTATACCCTTGTTGATCACGCGAAGGATTTTCCGG
DNA Sequence for Gene
>AA065_RS18675
ATGTTGCCGAGCTTTCCTGCCGTCACCCGCTGCCTGTCACTTGCCGCCCTGTGTGTGGCCGGTCCCGTTGCTGCATTGGAGCTTCCCTTGCCACCACCCG GTGAAGACATCGTCGGCCAGGTGCAAGTGATCAAAGCCAAGTACGAAGACACCTTCGCCGATCTGGGCACCACCTACGATCTGGGCTATTCGGAAATGGT CGCGGCCAACCCGGGCGTCGATGCCTGGCTGCCAGGTGCCGGTACCGAGATCGTTCTGCCGACGCGTTTCATTCTGCCGCCGGGCCCGCGTGAAGGTATC GTCATCAACCTTGCCGAATACCGCCTCTATTACTACCCCAAAGGGCGGAACGTGGTGTACACCTTCCCGCTGGGTATCGGCCGTGAAGGCTGGGGTTCGC CGATCGCGCACACCACCATCATCGCCAAAACCCCTAATCCGACCTGGACGCCTCCGGCGTCGATCAAGGCTGAACACGCCGCTGATGGTGATCCGCTGCC AAACGTGGTGCCGGCCGGTCCTGACAACCCTCTGGGCCCGTTCAAGTTCACCCTGGGCACGCCGGGTTACCTGATTCACGGTTCGAACAAGAAGTTCGGC ATTGGCATGCGCACCAGCCACGGTTGCTTCCGCATGTTCAACAACAACGTGCTGGAAATGGCTGGCATGGTGCCGGTCGGGACTTCGGTGCGCATCCTCA ATGATGCGTACAAGTTCGGTCGCAGTGGCGGCAAGGTCTATCTGGAAGCGCACACGCCGATCGACGACAAAGGTAATCCGTCGGTGGTCGACAAGCACAC GGCGGTGATCAACGCGATGCTCAAGCGTGAAGACATCACCAACAACCTGCGCATGAATTGGGATGTGGTGCGCGATGTAGTCGCAGCCGAAGATGGCCTG CCAACCGAAATCGGTACGCCTGGCACCTCGGCGCCGATGGTCTCCAGCGCCCCGATCGATCTGCAGCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCTCAAACAAAGAACCCGCCGATGCGTGAGCGTCGGCGGGTTTTTTATTGTCCGGACAAAAGCATCCGGCACAAAAAAGCCGACCCAAAATATGGGTCGG CTTGATAATAATCCCGAAGGACTATTACTTGCGGCTAGCTTTTTCCAGCATGCGCAGAGCACGCTCGTTAGCTTCGTCAGCAGTCTGTTGTGCTTTTTGA GCAGCAGCCAGAGCTTCATCAGCTTTACGGTAAGCTTCGTCTGCACGAGCCTGGGAGCGAGCAGCTGCGTCTTCAGTAGCGGTCAGACGTGCTTCGGTTT CTTTCGATGCGCTGCTGCAACCGGTAGCCAGAACTGCGGCCAGAGCCAGAGCAGAGAATTTCAGAACGTTGTTCATCGTGTTCCCCTTCAAGGACTTTCA ATTAAGTGGCTGTCTCCTCCGATTGAGGAAATAGCCGGCGTACATACTACCCATTACTTGTAGTAAGTAAACTGACGTAGAGCAAGAAGCAAAAAAATTG
Amino Acid Sequence
>transpeptidase
MLPSFPAVTRCLSLAALCVAGPVAALELPLPPPGEDIVGQVQVIKAKYEDTFADLGTTYDLGYSEMVAANPGVDAWLPGAGTEIVLPTRFILPPGPREGI VINLAEYRLYYYPKGRNVVYTFPLGIGREGWGSPIAHTTIIAKTPNPTWTPPASIKAEHAADGDPLPNVVPAGPDNPLGPFKFTLGTPGYLIHGSNKKFG IGMRTSHGCFRMFNNNVLEMAGMVPVGTSVRILNDAYKFGRSGGKVYLEAHTPIDDKGNPSVVDKHTAVINAMLKREDITNNLRMNWDVVRDVVAAEDGL PTEIGTPGTSAPMVSSAPIDLQQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site