Pseudomonas fluorescens AU11114, AA065_RS18195
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU11114 Contig_6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCAACCGTGGTGTCTGAGGTCAAGGATCAGTTTTACGGTGATCGCAGTGGGACGTTGAAGGACCCCTACGGGCATTTGTGGTTTCTCGCGACCCACAAG GAAGATCTGACTGAAGAGCAGATCAAGCAGCGGGCGATGGAGATGTTCAGGCAAGGCTGATTACATCAGTGTCCGAACTGACTCTTTCGCGAGCAGGCTC GCTCCCACCTTGGAATGCATTTCAAATGTGGGAGCGAGCCTGCTCGCGAAAGCTCTTACAAATCCGGCATTGAAGCGGACTGACACACTCCACCAGCCCG CCCCTCCCACAATACGTTGCGATGCCGAACAGAACGCGAAACATTTACTTTCACATTCCTTATCGGGATTTATCTCGCTCATCCGTCCTATAGAGATGCA GGCCGCTCGCGTAGGCAAAAGCCACGGGCGCCTTTCGGGGATACCCGTGCTGTGAAGCCCGCAGCCACGCGCCCTTTCACCGCTCTATAGACGCGTAATC
|
|
| DNA Sequence for Gene |
>AA065_RS18195
ATGTCGAAAAAATCCCGTTCCAAACTGTGGTTCCTGGTACATAGCTGGCTCGCATTACCGATCTGGTTTTTCGTCCTGATCGTTTGCGTGACCGGAACGC TGGCGGTGGTCAGCCAGGAAATCGTCTGGCTGGCCAATCCACAGATGCGTGCCAGTCAGCCATCGGACGATGCGCCGCTGCTCAGTTATGACCAGATTCT GGCCGCGATCAAAAAAGCCGAACCGCAGACCGTGGTCGAAAGCATCTCCCGCCCTGACGAATCGCACTTCGCCCTGGACGTCGAGGTCAGCTACCCGGAC GGGCGCTCGCTGACGGTGTACGTCAACCCATACACCGGGGTGATCCAGGGCACCGCGCCAGCCTTTGACTTCAAGGCTTTCACCCGCGCCTTGCATGGTT GGTGGCTAGTGCCGTTCACCAACGGCTTCAGTTGGGGATGGTATCTGGTGTCATTCCTTGGCGTGCCGATGCTGGTGTCGTTGATTACCGGCCTAGTGGT CTATAAGCGATTCTGGAAGGGCTTCTTGCGCCCGACTCTACGTATTCGCCATGGCGCGCGTATTTTCTGGGGCGATTTCCACCGTCTCAGCGGTATCTGG TCGATCTGGTTCATTGCGGTGATTTCCATCACCGGTGTCTGGTTTTTGATTCGGGCCTTCCTGTTCGATAACCAGATCTCCATCTCCAGCGAGCCGATCA TCCCGGCCATGTCCCGTGAAAGCGTGCCGATTTCGGCGGCCGGCACTCCGCCGCCACGTATCAGCCTGGACCGCGCCGTAGAAATCGCTCAGCAAAAGAT TCCGGGGCTGGAGGCCAGTTTCGTCAGCCTGCCGGGTAACGCTTACAGTCACATGAGCGTTGGCGGTCGCGGCTGGTATCCATTGATGTTCCAGACGGCG ACGCTCAATCCGTACAACGGTGAGATGGCGGCTACACGGCTGCTGTCCGATCGTTCCTCGCTGGAGTTCGTCACAGAATCCATGCGCCCGCTGCACACCG GTGACTTCGGCGGGATCTGGATAAAGTTGATCTGGTTCTTCTTTGGCCTGCTGCTGAGCATGATGGTGCTCAGCGGCTTGCTGATCTGGACCAAACGCAC CGCTCTGGCCACCGCCAATGCGCTCAAGCGCGAGGACAAAAAAAACCGGATCAAGGTACAACCGGCCCTCAGCCGTGAGCCTTCGGAGGTCAGCCTGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCAAGTCCACAGCGATCACGCCGCCATCGCGACTGGGGCGACTTTGGCACAAATGGCGATTCCACATAAATGTCCTGTTGTTGCTGATCCCGCTTGGTTT CATGCCCAAGTATTTTGCCGACGCTTCACTGTTTCGCGGCGACAGCGGCCTGGGACAACATGAAATCGGCAATATCCAGGTCGGCCCCTGGAGCCTGCGA CTGGCCGAACTGCGCAACGAAGCCCCCACCCTCACGGGCCCGGCCGGCTATATGAAAGATTTCAGCGCGGCCCTGTGCGATGCCTGTGTCGACAAGGTCA AGGCCACTTACCTGCGCATCGGCAAACCGCGTAGCTTGCGCGCAGCCGGGGCGATTTTTTTCGGTACGCCATACCGTATGGGCACGCAACTGCCGATCCC GGAGAAGACCAAACCCGACGCCGAACTGTGGATCACCATGGAAGGCTGGGACGGCAGCATGCATCAGGCCTCGATTCCCCTGAGCCAGGCCTCCCCCGCC
|
|
| Amino Acid Sequence |
>peptidase
MSKKSRSKLWFLVHSWLALPIWFFVLIVCVTGTLAVVSQEIVWLANPQMRASQPSDDAPLLSYDQILAAIKKAEPQTVVESISRPDESHFALDVEVSYPD GRSLTVYVNPYTGVIQGTAPAFDFKAFTRALHGWWLVPFTNGFSWGWYLVSFLGVPMLVSLITGLVVYKRFWKGFLRPTLRIRHGARIFWGDFHRLSGIW SIWFIAVISITGVWFLIRAFLFDNQISISSEPIIPAMSRESVPISAAGTPPPRISLDRAVEIAQQKIPGLEASFVSLPGNAYSHMSVGGRGWYPLMFQTA TLNPYNGEMAATRLLSDRSSLEFVTESMRPLHTGDFGGIWIKLIWFFFGLLLSMMVLSGLLIWTKRTALATANALKREDKKNRIKVQPALSREPSEVSL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|