Pseudomonas fluorescens AU11114, AA065_RS06945

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU11114 Contig_58, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTCCGTGTCTGAATTGCGGTGCCTGCTGTTCCCATTTTCGCGTGTCTTTTTTCTGGGGTGAATGTGCTTCGTCCGGGGGTACAGTGCCCGATGAGCTGGT GACTCAAATCTCTCCCAGCCGGGTAGCGATGAACGGCACCGACTGCAAATCGCCTCGATGCACCGCATTGGAGGGTGACGTTGGCAGCACCGTGAGCTGT TCGATTTATGACAAACGCTCCAGCACCTGCCGTGAATTCGAGTCGTCTTGGGAAAACGGCGAGCAAAATGTCGATTGCGACAAGGCGCGCGCCCGTTTCG GACTGCCTCCCTTGCAACCGGACTGGGCCGAAATCCCCTTTGAGAAGAGCGCCTGACCCTTAGCGCCAATCGCTATGACGCTAATGCCGAAATCATTAGC GCCAATGTGCCACTACCGCTTGCTCCCCGAAAACCGCCTCTATACTTCTGTCTTCAGCCAGCGTTAACCGCGCGGTAGGACTTCAGAGACGGGGCGTGCT
DNA Sequence for Gene
>AA065_RS06945
ATGGAGTGGCTTGGTTTGCAGTTCGTTACCGAGCTGCCGGAGAGCGGGCAGGTCATTCTTGATTGCACACATAATCCCTTGCTGGTGCTGGTGGCCTATC TGGTTGCTTGCGCTGCGAGTTTTGCCACCCTCGATATGGCCGAGCGGGTTGCCCACGCCGACGACCCGAGTTCGCAGCGATTGTGGCGCTGGATAGGCGC CACCTGCCTGGCCGGCGGCATCTGGGCCATGCATTTCATCGGCATGCTCGCCTTTCAGGCGCCGATTGAAATCCAGTACGACCTGCCGATCACCCTGTTT TCCCTGTTGATCGCCCTGCTCGCCTCGTGGCTGGCGATGTACACGCTGAGCCATGCGCAGCCAAGCCTGGTGCTCTACCTGAAAACCGCACTGCTCATCG GCCTCGGCATCGCCGGCATGCATTACGTGGGTATGGCCGCCATGCAATCGCGCGCCACTGCGTACTACGAACCGTCCCTGTTTGCGCTGTCGATCGCGAT CGCCATCGGCGCCAGTTTCGCCGCGCTGTGGGTAGCCGGTTACTTGCGCGAAGGCAGTGGCATGGCTCATCAACTGCTCAAATACAGCGCGGCGCTGATT CTCGGCGCGGGCATTTTCAGCATGCATTTCACTGGAATGGCAGCCCTGCAACTGGTGTTGCCCGAGGGCAGCCTGCCCGCGACGCCCGTCGATACCAGCC AGCTGCAACTGGGCCTGACAGTCGCGCTGATCATCCTGCTGATTCTGAGCAGCGCGATCAGCGCGGCGCTGTTCGACAAGAAACTGCAGAACAAGGAAAA CGACCTGCGCCGGGTCAACGCCCTGCTCAGCCAACTTGATCAGGCACGCATGGCGCTGCAACAAGTGGCCAACTACGACGCCCTGACCAACCTGATAAAC CGCCGCGGCTTCAATCAGATCTTTGCCGAGAAGCTCAGCCAGAAAACCACCGAAGGCGGCATGCTGGCGGTGATGTTTCTCGACATCGACCACTTCAAAC GCATCAACGACAGCCTTGGCCACGACGCCGGTGATGCCCTGCTCAAGGTCATTGCCAATCACATCAAAGGTTCGGTGCGCAGCCATGAAGATGTGGTCGC GCGTTTCGGCGGTGACGAGTTCTGCATCCTGATCAGCCTGCGCGACCGCGATGAGGCGCGCAACATGGCCCAGCGGATCATGGCCAAGATGAAGGAGCCG ATAGAACTGGCCGGACGCCGCATGTTGATGACCACCAGCATCGGCATCAGTCTGTTTCCTGAAGATGGCAGCACCTGCGAAGAATTGCTCAAGCACGCCG ATCTGGCGCTGTATCAATCCAAGGGCGCCGGGCGCAATGGCCTGCACTTTTTCAGTTCCAGCCTGAAAAACCGCGCGACCCTCGAATTGCAACTCGAAGA AGAACTGCGCCACGCACTGCGCGAAGAAAACGGCCTGACGCTGTATTACCAACCGATCTTCGAACTGAAAACGGGTCGGGTGACCAAGCTCGAAGCGCTG ATCCGCTGGCAGCATCCGATTCGTGGTCTGCTGACACCTGACTCATTTATCAGCATCGCGGAAAACAATGGCCTGATTGCCGAGCTGGACAACTGGGTGC TGCGCCGGGCCTGCAAGGACCTGGGCGAGCTGTCGAAACATGGCTGCGAAGATCTGAAAATCGCCTGGAACTGTTCGCCGTTGAACCTCGCTCGCGAAGA ACTGGCCGACGAAATCGAAAATGCGCTGCGCACCGCTGGCGTCGCTCCGGAACGTCTGGAACTGGAAGTCACCGAAAATGCCTTGATGGGCAATATCGCC GATACTCTGGTGCTGTTGCGGCAGATCCGCGCCCTCGGCGTGTCGCTGTCGATCGACGACTTCGGCACTGGCTACTCGTCACTGGCTTACCTCAAGCGCT TACCGCTCAACACGCTGAAGATTGACCGTTCGTTCATCCTCGACATTCCCAAGGCGACGGCAGACATGGAGATCGTCCAGGCGATCATCGTCATGGCCCA CACCCTGCATTTGCAGGTGGTCACCGAAGGCGTCGAAAGCCTGGAGCAGTACGAATTCCTCGAACGCTCCGGCTGCGACTTCATTCAGGGTTACTTGCTC AGCCGCCCGGTGCCGCTGGACGAGCTACGCCCGGTGCTGGAAGAAATCAATCAACGCGAACAATCACACTCGGTCAATCCGTTGATTCTGGCGCGCGGTA CATTTGCACCAGTGTCGCTGGATCTTGCTCCAAAAAGCCTTGCGCCCCATGCAGGCGCATCAGTTGTGCGGCCAATCCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGGCGTGGCCGAGCCTTGCTCGCGGGAGAATTTCACGGCGGTGTCGAGATCCTTGAGCAGCGTGCGCACGTGCCATTTCACCGGTTCGAAACGGCTCTC GGCCATTTGCGGTGCGAGGATCTGCAACGGTTTCGAATCGGCAAAACCACCGGCCAACGCTTCAGCGATCAAGCGCGCATCGACCCCGGCCTGCTCGGCC AGTGCCACCACTTCAGCGATCACCAGCGCATTGCAGGCGACGATCATCTGATTGCAGGCCTTGGTCACTTGACCGGCACCCACGCCGCCCATGTGCGTGA CGCGCTGGCCAAGATTGAGCAGCACCGAGCGTACGCGCTCAAGATCTGCCGCCTCACCACCGACCATGATCGCCAGACTGCCGGCCTCGGCGCCGACCAC CCCGCCTGACACAGGAGAGTCGAGCCAGGCCATGCCGGTTTGACTCAGCAATTGCGCGGCCATCTCTCGAGTGGCCGTAGGTTCGAGACTGGAAAAATCC
Amino Acid Sequence
>diguanylate phosphodiesterase
MEWLGLQFVTELPESGQVILDCTHNPLLVLVAYLVACAASFATLDMAERVAHADDPSSQRLWRWIGATCLAGGIWAMHFIGMLAFQAPIEIQYDLPITLF SLLIALLASWLAMYTLSHAQPSLVLYLKTALLIGLGIAGMHYVGMAAMQSRATAYYEPSLFALSIAIAIGASFAALWVAGYLREGSGMAHQLLKYSAALI LGAGIFSMHFTGMAALQLVLPEGSLPATPVDTSQLQLGLTVALIILLILSSAISAALFDKKLQNKENDLRRVNALLSQLDQARMALQQVANYDALTNLIN RRGFNQIFAEKLSQKTTEGGMLAVMFLDIDHFKRINDSLGHDAGDALLKVIANHIKGSVRSHEDVVARFGGDEFCILISLRDRDEARNMAQRIMAKMKEP IELAGRRMLMTTSIGISLFPEDGSTCEELLKHADLALYQSKGAGRNGLHFFSSSLKNRATLELQLEEELRHALREENGLTLYYQPIFELKTGRVTKLEAL IRWQHPIRGLLTPDSFISIAENNGLIAELDNWVLRRACKDLGELSKHGCEDLKIAWNCSPLNLAREELADEIENALRTAGVAPERLELEVTENALMGNIA DTLVLLRQIRALGVSLSIDDFGTGYSSLAYLKRLPLNTLKIDRSFILDIPKATADMEIVQAIIVMAHTLHLQVVTEGVESLEQYEFLERSGCDFIQGYLL SRPVPLDELRPVLEEINQREQSHSVNPLILARGTFAPVSLDLAPKSLAPHAGASVVRPIR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site