Pseudomonas fluorescens AU11114, AA065_RS04360
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU11114 Contig_58, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGAGCGCGAGGCCGGTAAAGCGGCGTTCGTGCTGGGGCTGTGCTTTATTTCCGAAGGGGCGATTCCTTTTGCCGCGAAAGACCCGCTGCGGGTGATCCC TGCGAGCATTGCCGGCGGTGCATTGACCGGCGCGCTGTCGATGTACTTCGGCTGCAAGCTGATGGCGCCGCACGGTGGGTTGTTTGTGTTGGCGATTCCG AATGCGATCAACCACGCGTTGCTGTATCTGCTGGCGATTGTCGCGGGGAGTTTGTTGACTGCCGTTGTGTATGCGACGGTCAAACGCCCGGAAGCGGTGG AGTTGGCAATGGAGCCCGCCAAGGCCTGACACCGCACTAAAACTGTGGGAGCGAGCCTGCTCGCGAATGCAATCTGCCAGCGACATGTATGTTGACTGGC ACACCGCTTTCGCGAGCAGGCTCGCTCCCACAATGGTTAGTGGTGTCATGGCGAGTTCATATAGGCGTGCTTTAGTTTTCCTTTTTTCAGGGAGAACAGC
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| DNA Sequence for Gene |
>AA065_RS04360
ATGAGCGATTTCAATGTGGGTCGCCGGCGTGTCATGCAAGTGGTCGGCGCCGGACTGCTGATGCCGGGGCTGGCGCCGGCGGTGATCGCATCGGTCAAGG ATCGACCGCAACTGACCGATGGCGTGCAGTCCGGCGACCTGCAAGGCGACCGCGCGATGATCTGGAGCCGCAGCGACCGCCCGGCCCGGATGGTGGTCGA GTGGGACACCCGCAGCCAGTTTCGCAATCCACGGCGTATCGTCTCGGCGCTGGCGGATGCCCGCAGCGACTTTACAGCCCGCGTCGAACTCACCGGGTTA CCCGCCGATCAGGCGATTTTCTATCGCGTGTATTTCAAGGACGCCCGCAGCGGCGTCGCCAGCGAACCGTGGCTCGGCCACTTGCGCAGCGCACCCTCGG CGCGGCGTGATATTCGTTTCGTCTGGAGCGGCGACACCGTCGGCCAGGGCTTCGGCATCAATCCGGACATCGGCGGCATGCGCATCTACGAAGCCATGCG TCTGCGTTTGCCGGACTTCTTCATCCACAGCGGCGACACCATCTACGCCGACGGCCCGGTGCCCGCGCAACTGACCACTGAAAACGGCCGGGTGTGGCGC AACATCACCACCGAAGCCAAGAGCAAAGTCGCCCAGACCCTCGACGACTATCGCGGTAATTATCGCTACAACCTGATGGACGAAAACATTCGCCGCTTCA ACGCCGAAGTGCCGCAGATCTGGCAGTGGGATGACCATGAAGTGGTCAACAACTGGTCGCCCGGCAAGCAGCTCGACGAGCGCTATCAGGAAAAAGACAT CCACACCCTGGTCGGCCGCGCGCGCAAGGCCTGGCTGGAATATTCGCCGATGCGTTTGCAGGCGGCTGACGCGGGCGGGCGAATTTATCGCAAGCTCAAG TACGGGCCGATGCTGGATGTGTTCGTGCTCGACATGCGCAGTTATCGCGAGGCCAACGACGACAACCTCGGCGCAGCAAAACCGTTCCTCGGGCGGGAGC AGCTGGATTGGCTCAAGCGCGGGTTGAAGGCCTCGAAAGCGCAGTGGAAGGTCATCGCGGCAGACATGCCGATTGGCCTGGGCGTGCCTGACGGCGAGGT GAGTCCGGGTGTTGCGCGCTGGGAGGCCGTGGCCAACGGCGACCCGGGACCGGCACAGGGACGTGAACTGGAGATCGCTGAATTGCTCGGTTTTCTGCGG GCGCAGCAGGTGCGCAATTTCGTCTTCCTCACGGCAGATGTGCACTACTGCGCGGCGCATCACTATCACCCGGATCGCGCGGCGTTTCAGGATTTCGAGC CGTTCTGGGAGTTTGTCGCGGGGCCGTTGAATGCCGGAAGTTTCGGGCCTAATCCGCTGGATAAGACCTTTGGGCCTGAGGTGGTTTTCGAGAAGGCACC GACGGCGCAGAACATGTCACCGTTTGCCGGATTTCAGTTTTTTGGCGAGGTGAATATTGAGGGGCAAAGTGGGGAGATGAGCGTGGTGTTGCGGGATTTG AATGGGGTCAGTGTGTTCGAGAAAAAACTGCAGCCAGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AACCCCCTGTAGGAGCTGCCGCAGCCTGCGGCAGCTCCTACAGGGGAGTGGGGGTGTCAGTAAACATCCCGGCGATAACGACCCTGCTCAATCAGGCGTT CAACCTCAGCAGCGCCGAGCACTTCGTTGAGCACTTGATCGACGCCTGATGCCATCCCTTGCAGGCTGCCGCAGATGTAGATAACAGCACCCTCCGCCAG CCATTTCTTCAACTCCTCAGCCGATTCCCGCAAGCGATCCTGCACATAAACCTTCTCTGCCTGATCACGCGAAAACGCCAGATCCAGTCGTGCCAGATCG CCATTGATCAACCACTCTTCCAGCTCCGCCCGGCACAGGTAATCGTGCTCACGATGACGCTCGCCGAACAGCAACCACTGACGTTGCCGAGCATCAGCAA TGCGCGCCTTGAGCAGGCTGCGCAGACCGGCCAGCCCTGTGCCGTTACCGATCAGAATCATTGGCACCGGTTCATTCGGCAGGTGGAAACCACTGTTACG
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| Amino Acid Sequence |
>alkaline phosphatase
MSDFNVGRRRVMQVVGAGLLMPGLAPAVIASVKDRPQLTDGVQSGDLQGDRAMIWSRSDRPARMVVEWDTRSQFRNPRRIVSALADARSDFTARVELTGL PADQAIFYRVYFKDARSGVASEPWLGHLRSAPSARRDIRFVWSGDTVGQGFGINPDIGGMRIYEAMRLRLPDFFIHSGDTIYADGPVPAQLTTENGRVWR NITTEAKSKVAQTLDDYRGNYRYNLMDENIRRFNAEVPQIWQWDDHEVVNNWSPGKQLDERYQEKDIHTLVGRARKAWLEYSPMRLQAADAGGRIYRKLK YGPMLDVFVLDMRSYREANDDNLGAAKPFLGREQLDWLKRGLKASKAQWKVIAADMPIGLGVPDGEVSPGVARWEAVANGDPGPAQGRELEIAELLGFLR AQQVRNFVFLTADVHYCAAHHYHPDRAAFQDFEPFWEFVAGPLNAGSFGPNPLDKTFGPEVVFEKAPTAQNMSPFAGFQFFGEVNIEGQSGEMSVVLRDL NGVSVFEKKLQPV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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