Pseudomonas fluorescens AU11114, AA065_RS08935

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU11114 Contig_50, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTGGGCCTGATGCAGCCGTGGCGCTTCATTCGCATCAGCGACCGAGCCCTGCGCGGGCAGATCCGGAACCTGGTGGAAGAAGAACGCATCCGTACCGCTG TTGCCCTCGGCGAGCGCAGCGATGAGTTCATGACACTCAAGGTCGAAGGCATCAATGATTGCGCGGAAGTGCTGGTCGCCGCGTTGATGGACGATCGTGA AAAACACATCTTCGGTCGCCGCACGCTGCCGGAAATGGACATGGCGTCGCTGTCCTGTGCGATCCAGAACCTGTGGCTGGCGTCCCGCGCCGAAGGTTTG GGCATGGGCTGGGTCTCGCTGTTCGAGCCCCAGGCGCTGGCCGATCTGTTGAAGCTGCCGGAAGGCGCCAAGCCACTCGCGGTATTGTGCCTGGGCCCGG TCAAGGAATTCTATCCGGCGCCGATGCTGGTGCTTGAAGGGTGGGCGCAGGCGCGTCCGCTCAATGAGTTGCTGTATGAAAATTATTGGGGAGTGAATCA
DNA Sequence for Gene
>AA065_RS08935
ATGAGTGTGGCGTTGTTGAGTGTCGCCGCCGTGGCGCTGGATGCGCTGCTGGGTGAACCGAAACGCTGGCATCCGCTGGTGGCGTTCGGCAACTTTGCCG GGCGCATCGAGCAACGTTTCAACGCCGGTGGCCGTGGCTGGCGCAGTCATGGCGTCACCGCGTGGGTGATCGCGGTGTTACCGCTGACGTTGCTCGCCAC CGCGTTTTCCTGGGCGCCTTATGTTGGCTGGATCGTCGAGATACTCGCGCTGTATTGCGCCCTCGGCATGCGCAGCCTCGGCGAGCACGTCGAGCCGGTG GCCAAGGCATTGCGCGCCGATGATCTGGATGAGGCGCGCAAGCGTGTCGGCTATCTGGTCAGCCGCCAGACCAGCGAACTCGACAGCACCGCCGTCGCCC GTGCTGCCACCGAATCGGTGCTGGAGAATGGCAGCGATGCGGTGTTTGCCGCGTTGTTCTGGTTTGCCGTGGCCGGCGCGCCGGGCGTGGTGCTCTATCG CTTGAGCAATACGCTTGATGCGATGTGGGGTTATCGCAACGAACGTTTCGAACGATTTGGCTGGTGTGCGGCAAAAATCGACGACGTCCTCAACTACATT CCCGCGCGCCTCGTAGCGTTGACCTACGCGCTGCTGGGCAAAACCCGACTGGCCCTGAAGTGCTGGCGTACACAGGCGCCAAAATGGGACAGCCCCAACG CCGGCCCGGTAATGGCGGCAGGCGCCGGCGCGCTGGGCGTGGAACTGGGCGGCCCGGCGATCTATCACGGCGAACTGCATGAACGTCCGCAACTCGGCGA GGGCACACCTGCCGATGCCGATTCCATCGACCGCGGCTGGCAATTGGTCCAGCGCGGGGTATGGTTATGGCTGCTGATTCTTTGCGTGGGAGCTGAATTC TATGCTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCACGGTGGCCGACTGCGCAAGGCTGCACTCGATCACGGCATCGCCGAGGCTGATTGGCTGGATCTTTCCAGCGGTCTGGCGCCATGGCCGTTCCCGATC CCGGATATTCCGCTGCGCGCCTGGGCACGCTTGCCGGAAACCGACGATGGTCTGGAGCAGGCGGCGTGTGATTACTACGGTGCGGCGCAGGTGTTGCCGG TGGCCGGTTCGCAAATGGCCATTCAGTTGCTGCCGCGTTTGCGCCGGGCCGGCAAGGTCGGCGTGTTGTCGCCGTGTTATGCCGAGCACGCCGAGGCGTG GCGCCGCAGCGGTTACATCGTGCGCGAAGTGCTGGAGCAGGAAGTCGAGTTCTTTATCGACAACCTCGACGTACTGGTGGTGGTCAACCCGAACAATCCC ACGGGCCTGAGCCTGACCCCGGCGCGTTTGCTCGACTGGCATGCGCGGCTGGCGCAGCGCGGTGGCTGGCTGGTGGTCGATGAAGCGTTCATGGACAACA
Amino Acid Sequence
>cobalamin biosynthesis protein CobD
MSVALLSVAAVALDALLGEPKRWHPLVAFGNFAGRIEQRFNAGGRGWRSHGVTAWVIAVLPLTLLATAFSWAPYVGWIVEILALYCALGMRSLGEHVEPV AKALRADDLDEARKRVGYLVSRQTSELDSTAVARAATESVLENGSDAVFAALFWFAVAGAPGVVLYRLSNTLDAMWGYRNERFERFGWCAAKIDDVLNYI PARLVALTYALLGKTRLALKCWRTQAPKWDSPNAGPVMAAGAGALGVELGGPAIYHGELHERPQLGEGTPADADSIDRGWQLVQRGVWLWLLILCVGAEF YA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site