Pseudomonas fluorescens AU11114, AA065_RS16905

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU11114 Contig_38, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGGCGCCGAACAACTGCTCGGCCACGGTGACATGCTCTACATGCCACCGGGTACCAGTCTGCCGATCCGGGTTCACGGTGCGTTCGTGTCCGATGAAGAA GTCCATCGTGTGGTCGAGGCGTGGAAACTGCGCGGCGCCCCGGAATACAACGACGACATCCTCAACGGTGTCGAAGAGGCGGGCAGCGGCTTTGAAGGCA GCAGCGGTGGTGGCGACGGCGACGATCCTGAGGCAGACGCACTGTATGACGAAGCCGTACAGTTCGTGCTGGAAAGCCGTCGCGCATCGATCTCCGCTGT ACAGCGCAAGCTGAAAATCGGCTACAACCGCGCGGCACGGATGATCGAAGCCATGGAAATGGCCGGCGTCGTCACATCAATGAACACCAACGGTTCGCGT GAAGTCCTGGCGCCTGGCCCGGTACGCGACTGATTGCAAAAGCAAGAGGCGGGACAATGATGTGCCGCCGCTCTCCCAACGAGTATTCAAGAGGACTCCC
DNA Sequence for Gene
>AA065_RS16905
ATGCGTCTTATCCGCATGCTGCTGCCAGTACTGGCTCTGACCACACTCACGGCCCACGCCGATGACAAGGACGTGGCGCGTCTGACCCAATTGCTGGAAA CATCCAAGACCCTGAGCGCAAACTTCTCGCAGCTGACCCTTGATGGCGGCGGCACGCAGTTGCAGGAAACCACTGGCAACATGACCTTGCAGCGTCCGGG CCTGTTCTACTGGCACACCAATGCGCCGGCCGAGCAGACCATGGTTTCTGACGGCAAGAAAGTCACCCTGTGGGACCCGGATCTTGAGCAGGCAACCATC AAGAAACTCGATGAGCGTCTGACCCAGACCCCGGCGCTGCTGCTGTCCGGTGACGTGTCGAAGATCAGCCAGAGCTTCGACATCAGCGCGAAAGAGGCGG GCGGCGTGATCGACTTCACCCTCAAGCCGAAAACCAAGGACACGCTGTTCGACAACCTGCGCCTGTCGTTCCGCAACGGTCTGCTCAACGACATGCAACT GATCGACAGCGTTGGTCAGCGCACCAACATCCTGTTCACCGGGGTGAAGGCCAACGAGCCGGTGCCAGCGTCGAAGTTCAAGTTCGATATCCCGAAGGGC GCTGACGTTATCCAGGAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACGCTCCCACAGGAGTTGCTGTTCTCACTGAGGTTTCATAGGTAGTGATGGATCTGTTTCGCAGTGCACCGATTGCCCAGCCACTGGCCGCGCGTTTGCG TGCGACCAATCTGGATGAGTACGTCGGTCAGGAGCACTTGCTGGCTCGCGGCAAGCCTCTGCGTGAGGCGCTGGAGCAGGGTGCTCTGCATTCGATGATT TTCTGGGGCCCGCCGGGCGTGGGTAAAACCACGCTGGCGCGTTTGCTCGCGGAAGTCTCGGATGCACACTTCGAAACGGTGTCGGCGGTGCTCGCCGGGG TCAAGGAGATCCGTCAAGCCGTTGAAATCGCCAAGCAGCAGGCCGGCCAGTACGGCAAGCGCACGATTCTGTTCGTCGATGAAGTGCACCGCTTCAACAA GTCCCAGCAGGACGCGTTCCTGCCGTACGTTGAAGACGGCACGCTGATCTTCATCGGCGCCACCACTGAAAACCCTTCGTTTGAACTGAACAACGCGCTG
Amino Acid Sequence
>membrane protein
MRLIRMLLPVLALTTLTAHADDKDVARLTQLLETSKTLSANFSQLTLDGGGTQLQETTGNMTLQRPGLFYWHTNAPAEQTMVSDGKKVTLWDPDLEQATI KKLDERLTQTPALLLSGDVSKISQSFDISAKEAGGVIDFTLKPKTKDTLFDNLRLSFRNGLLNDMQLIDSVGQRTNILFTGVKANEPVPASKFKFDIPKG ADVIQE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site