Strain | Pseudomonas fluorescens strain AU11114 Contig_38, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GAATTCGATCAGCGCTTCCACACGCGGCTGTATCACCGCTATCCGATCATTGCCGTGGTGCGTGACGACCATCCCTGGGCTAGCCAGGAGCAGGTACACG TCAGCCAGATCAGCCATGAGAAATGGGTGCTGCGCGAGCAGAGTTCGCGCACCCGGCAACTGGTGGAAGAAAGCTGCACGCGGCTTAACGTCAGGCTCGA TTGCGTAATGCAGTTGAACAGCCGCGAGGCGATCGTCCATGCGATCGCCAAAGGCATCGGCATCGGCCTGGTGTCCGCCGTCGAGTATGCGCAGACCCCG GGCACCAAGCCGATCACCTTTGTCGACCATCCGTTCTTCATCGAATACCACTTGTGCTGCCTCGGCATCCGCAGGAACCGACCGGTGATCGCGGAGCTGT TCGACTCGAATTCACCGATGCTCTGATTCAACACTTATTCCAACCGGCCTACCTCCATATCGAGGGACGGCACACGCTCACCTGAAAACGGAGATTGATC
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DNA Sequence for Gene |
>AA065_RS16015
ATGCAGTACAAGCAACCTACTTACGTGCAAGCCGCGATCCTCGACTGGGCCGGCACCGTTGTTGATTTCGGCTCGTTCGCGCCGACGCAGATTTTCGTCG AAGCCTTCGCCGAGTTCGGTGTCGCCGTGTCGCTGGAAGAGGCTCGTGGCCCGATGGGCATGGGCAAATGGGACCATATCCGCACTTTGTGCAACCTTGA TCAGATTGGCGAACGCTACCGCGCCGCGTTTGGTCGCTTGCCGAGCGATGACGATGTGACGGCGATCTACGAGCGCTTCATGCCGCTGCAGATTGAGAAA ATCGCCCTCCACTCTGCGTTGATCCCCGGCGCGCTTGAAGCCATTGCGGCGTTGCGTGACAAGGGTTTGAAGATCGGCTCGTGCTCAGGTTATCCGGCGG TGGTCATGGCCAGGGTCATCGAGCTGGCACGAAAAAACGGTTATGTCGCTGACCACGTCGTCGCTACCGATGAAGTGCCCAATGGTCGCCCTTATCCGGC ACAGGCACTGGCTAACGTGATAGCGCTGGGCATCAATGACGTGGCTGCGTGCGTGAAGGTTGACGACACCTGGCCGGGAATGCTCGAGGGTCGCAGTGCG GGAATGTGGACGGTGGCGCTGACCTGCTCCGGTAACGCGCTGGGCTTGACCTACGAGCAGTACAAGGCGCTACCGTCGGACAGACTCGCCGAGGAGCGCG CGCGCATCAGCAAGATGTTTGCCCCTTCGCGCCCGCATTACCTGATCGACACCATTGCAGAGTTACCCGAGGTGATCGACGACATCAACGCGCGGCTGGC CCGAGGCGAAACCCCTCAAGGCTGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCAATCCCCCGTAGGAGCTGCACAAGGCAGCCCCTACAGGGTTGTATCTGTTGAATTTCGGGCAAAAAAAAGCTGCCAGAAATGGCAGCAAAAACTTTA AGAACACGCGATGTGTTGAGCTCAGTATGGGTATCGAATAATGACAGTGTCATGACAAACAACAATTCACTGAACGGCCCCTGACCCGTCATCAGGATGT CATCAAGATAACGGCAGAATCCTCGCAAACCGTCTTGAGCCTCGCGACGGATGCTTTGCAAGGACTGCCATGAAAGACGACGCCTCGCTGTTTGCCGCCA TCGACCTGGGTTCGAATGCGTTTCGCTTGATGATCGGCCAGTCGGTCCGCAGTCGCAAAGGCCTGATGATTCAGGAAGTGAAAACCTTGCGCGAACCGGT GCGTCTGGCCGAGGGGCTCGACGGTGGTGCGCTTGACACCCTCGCCCTTGATCGAGGCTGGCAGGCATTGGCGCGGTTCGGCAAGAAACTGCGCGGATTC
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Amino Acid Sequence |
>phosphonoacetaldehyde hydrolase
MQYKQPTYVQAAILDWAGTVVDFGSFAPTQIFVEAFAEFGVAVSLEEARGPMGMGKWDHIRTLCNLDQIGERYRAAFGRLPSDDDVTAIYERFMPLQIEK IALHSALIPGALEAIAALRDKGLKIGSCSGYPAVVMARVIELARKNGYVADHVVATDEVPNGRPYPAQALANVIALGINDVAACVKVDDTWPGMLEGRSA GMWTVALTCSGNALGLTYEQYKALPSDRLAEERARISKMFAPSRPHYLIDTIAELPEVIDDINARLARGETPQGC
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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