Pseudomonas fluorescens AU11114, AA065_RS08420 (fliN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU11114 Contig_36, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATTTCGAGTACATCAACTCGGAAGTGAACCCGGCCATGGCCAACATCGTCGGCCCGAGCGAAGCGATTGTGGTCTCCACCTTCCACATCGAACTCGATGG CGGTGGCGGCGACCTGCACGTGACCATGCCGTACTCGATGATCGAGCCGGTGCGGGAAATGCTCGACGCCGGTTTCCAGTCGGACCTCGACGATCAGGAC GAGCGCTGGGTCAACGCCCTGCGCCAGGACGTGCTCGATGTCGACGTGCCGATCGGTGCCACCGTGGCCCGCCGCCAGTTGAAGCTGCGCGACATCCTGC ACATGCAGCCGGGGGATGTGATCCCGGTCGAGATGCCGGACGAAATGATCATGCGCGCCAACGGCGTGCCGGCCTTCAAGGTCAAGATGGGCTCGCACAA AGGCAACCTCGCGTTGCAGGTGATCGAGCCGATCGAGCGTCGCTGAAGCGGCGCTTTTACCCCCACATTTAGCTGAATTTTTGCCCGCCGAGGACAAATG
DNA Sequence for Gene
>AA065_RS08420 |fliN
ATGAACGACGATATGAACGCCCAGGACGATCAGGCACTGGCTGACGAATGGGCTGCTGCCCTGGAAGAGACCGGTGATGGTCAATCCGAAATCGACGCAC TGCTGGCGGCCGACGCATCCAGCGGCTCGCGCCTGCCGATGGAAGAGTTCGGCAGCGTGCCGAAGAACAACGATCCAGTGACACTGGACGGCCCGAACCT GGACGTGATCCTCGACATCCCGGTGTCCATCTCGATGGAAGTCGGCAGCACCGACATCAACATCCGCAACCTGCTGCAACTCAACCAGGGTTCGGTGATC GAGCTCGATCGCCTGGCCGGTGAGCCGCTGGACGTGCTGGTCAACGGCACGCTGATCGCTCACGGCGAAGTAGTGGTGGTCAACGAGAAGTTCGGCATCC GCCTGACCGACGTGATCAGCCCAAGCGAACGCATCAAGAAGCTGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTGAAAAGGTTTCTCTGGGCTCTGCTGGCCTTGCCCCTGAGCGTGTTGGCTGCCGAACCGGTGGCTGGCCACGCCGCGCCTGCCGCTGCTACCGCACCGA TGGTCAACAGTGGCGTGGCCGGGCAATTGACGCAGCTGGTGTTCGGCCTGCTGCTGGTGCTGGGGTTGATCTTCTTCCTCGCCTGGCTGTTGCGTCGGGT GCAGCAGGCGGGGCCGGCGGGTAAAGGGCAGGTGATCGAGCTGATTGGCTCGCGCGCGCTCGGCCCGCGTGACCGTCTGATGCTGGTGCAGGTCGGTAAT GAGCAGATTCTGCTCGGCTTGAGCCCCGGCACCATCACCGCGCTGCACGTGCTCAAGGAACCGGTCGAGGTGCCGAGCACCAGCGAGAAAGCGACGCCGG AATTTGCCCAGCATCTGCTGAGGATTCTCGGCAAGGATCAGAAGGATAAGAAGTAATGGGTGCGCTACGCATCGTCTTGACGCTGGCCCTGATGCTGGCC
Amino Acid Sequence
>flagellar motor switch protein
MNDDMNAQDDQALADEWAAALEETGDGQSEIDALLAADASSGSRLPMEEFGSVPKNNDPVTLDGPNLDVILDIPVSISMEVGSTDINIRNLLQLNQGSVI ELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site