Pseudomonas fluorescens AU11114, AA065_RS11870
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU11114 Contig_34, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCGGGCGATCTTGCCCAGGCCCGGCACTGTCGGATCGGCTTGAAAGGTTGATTCCTGCTCGGTAACGGCCAGCACCGAACACAGGTTTTGCGTGGTCGGG CTGATGTCCTGTGCAGCGAATGCCACGTAAATATCAGTCGCCCAGCCTTGGCGGTCAGCGATTTTCGCCGGCATCAGGCGCACGATCTCAGCCTTCACTT CGGCAGCAGGACGCGGGGCGGGCTCGCCATTGCGCTGGCTGGCGCAACCGGCCAGCACCAGCATTGCCGCGAGGGTGATCAGTAATCGAGGGGTGTGCAT GTTGCTTCATCCAGTCCGTTGAGGCGGGTTCACCATACGTTCAATAGCCCAATCTGAACACTTCCCCCTATCGAGCTACGACGAATCGATCACCACGCCG GTCTACGGCATCGTGTTCAAACCGTGGGACCACGTGTCGTTCTACGCCAACCACATCGGAGGCCTCGCCCGGCCTGCAAGGCGTAGCGCTGAACGCGTGG
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| DNA Sequence for Gene |
>AA065_RS11870
ATGCTGCGCACCGGCGGGCAATACGACGACGCGGCCAACAACCTCAGCCTGCCGACCTGGAACCGCTTTGACGCGGGTGCGCGTTATGCCTTCAAGGTCT CGGAGAAAGACGTGACGGTGCGTCTGGGCGTGGAGAACCTGGCCAACAAGATATATTGGGAATCGGCGCAGGGTGGATATCTGACGCAAGGTGAGCCGCG CGTGGCGAAGTTGTCGGGCACTATCGACTTCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTAACGCCACGGCACGAGAAAGGCCTCGCAGCTTCACGGTTGCGGGGCCTTTTTGGGTTTTGTGGCGCTTGATAAGGCCACTTCGCGAGCAGGCTCGCTC CCACGGGGGACTGCATTCCAAAGTGGGAGCGAGCCTGTTCGCAAAGACGGCCGGGCCTGGCCACCCTCTCCTTCTGATCCATACTTGCTCCACAGCAAAA GGAGCACACCCCCATGAACCGCAGCGACGTCCTGATCATCGGCGCCGGCCCCACCGGGCTGGTGCTGGCCCTGTGGCTGAGCAAGTTCGGCGTGCAGGTG CGCATCATCGACAAGACTGCCGCACCCGGCACCACTTCCCGGGCGCTGGCGGTGCAGGCGCGGACGCTAGAGCTTTATCGGCAACTGGACCTGGCCGAGA CCATCGTGCGCAACGGTCATCAGGTGGCGGCGGCAAACTTCTGGGTCAATGGCAAACCGGTCGCGCAGTTGCCGCTAAACCGTATCGGCGAAGGCCTGAC
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| Amino Acid Sequence |
>hypothetical protein
MLRTGGQYDDAANNLSLPTWNRFDAGARYAFKVSEKDVTVRLGVENLANKIYWESAQGGYLTQGEPRVAKLSGTIDF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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