Pseudomonas fluorescens AU11114, AA065_RS11710

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU11114 Contig_34, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTCTGGCAATGGCAGAGCCAACTCAATTTGCAGTACAGCCCTGATCCGCTGCCGGCCATCGAGCAACTGCTGGGTACCGACGATTCGGCGGTGCGCGCTT ATCGCGTCAGCAGTGCCTCCGGTGCCAGCGGTGCGATCTGGCGCAACACCCTGCGCCTGCCGCTGCGCAGCGAATGGCCGGTGCAGATCACCCCGCGTGT CGGCCTCGACCACGGCTGGATCAAGGCCGATCACGGCGCCCAGGGGCAACGCCTGAGCGGCGCCAGTGTCGGCCTGAATCTGGGCTGGAAGAACCTGCAA GTGGACGTCGATTACCAGCGCGCCCTCAACACCCCAAACGGACTGCAACATGAGCCCGAAACCTGGCTGATGCGGGTCGGGGTGCAGATATGACTGATAC GAACAATGCAGTGAACAAACAGCCGTCGGATCTGAGCGCGACAGCCACGGCCAACACCAAAACGCGCGACGTGATGCCGTACTTACATGGAGACGTTCTT
DNA Sequence for Gene
>AA065_RS11710
ATGCCAGCACCTACCTTTGCATTTCATCTTTCCCCACGGGGCAAATTGCGTTGGGCGATCGCCAGTCTGTTCTTCGCCGTGCACCTGCCGAGCGCTTTGG CCGGTGGCGTAGTCGTCGCTCCCGGACCGGGCGGCACCGCGCAATTGCAGACTCAGGGCGGTGTGCCCATCGTCAATATCGTCGCGCCTAACGGCTCGGG CCTGTCGCACAATCAGTTCCTCGACTACAACGTCGACCGCCAGGGCCTGGTGCTGAACAACGCCTTGCAGGACGGGCAATCGCAACTCGCCGGGCAACTG GCGGCCAACCCGCAACTGCAAGGGCAAGCGGCGAGCGTGATCCTCAACGAAGTGATCAGCCGCAACCCGTCGGCCATCAACGGCGCACAGGAAATCTTCG GTCGCGCCGCCGATTATGTGCTGGCCAACCCCAACGGAATTTCGGTGAATGGCGGCAGTTTCATCAACACGCCGAACGCCAATCTGGTGGTCGGTCGCCC GGAGTTGAACGACGGCAAACTGCAAGCCCTGAACACCCGCGACGCCAGCGGCCAGTTGCAGATTCAGAACGGCGGCCTGCGTAACGGCGAGGGCTCGATC AACCTGATTGCCCCGCGTATCGACAGCCAGGGCGCGCTCAATGCCCGCGATCAACTCAACCTCACCGTTGGCCGCAATCAGGTCGATTTCGCCAGCGGCC AGGTGAAGACTGTGGACCCGGCAGGCAACACCACCGATCAACGCATCGACGCCAGCCTGTTCGGGGCGATGCAAGCCGGACGCATCAACATCGTCAGCAC CGCTGAAGGCGCTGGCGTGCGAGTTGGCGCGGTACAAGTGGCCGGGCGCGATGGCGTGCAGATTCGTTCTGCCGGCGACCTCAGTGTCAGCGGCGATGCA GTGGCGAACAGTCTCGACGTGACGCGCGCGGGTATCCGTAGCAGCCAGGGCGATGTCGGCCTGCACAGCGGCAAGGACCTGACCTTGGCCGCCACCGATG TCAGTGGTCGTGACGTTAGCGTCGATGCCAAGCGCAATCTGACCCTGAGTACAGTTGAAAGCCGCAAGCTCCAGGAAAAGCGCGAAAACTGGAGTAACAG CACCATCGGCATCACGTGGGAAACCTACGACCGTACCCAAACTGACAGCGAGTCGCGTCAGCACGGCAGCCAGATTATCGCCAGCCGTGACGCGACATTG TCGTCCGGCAAAGACACTCAACTGAACGCTGCAAAAGTCGAAGCGGCGAAGAATCTCAGCGTGCAAAGTGGCGGTGATCTGCGTCTGACTGCCGCCACCG AAAGCCACACCCAGACCGATCAGGGCAATCACCGCAAACACTTGTGGAAAGCCAACTGGAACACCAGCAGCGAAGAGCAGCGCAGTGTCACCAGCCAGTT GAAGGCTGGCAATATCGCCCTGCAAACCGCCGCGCTGTTGCGTTCCGAAGGTGCCGAGTTGAACAGTGCGGGCGACCTGCAACTGGCCGGCAAACAGGTG GAAATCACCACGGCCACACGCACCGATCGCAGCAACGACAATCGCTATTCCGGCGATCTGGTTGGCGGTGGTTTCTTTGGCAAAACCGGTGATGCCGACA AGGGCCAGACCCAGCATCAGGGCAGCAAGGTCAATGCGGCGGGCAAACTGATCGTCAAGGCTGACGACGTACGCATCAGCGGCAGCCAGGTCCGTGGCGG CACCGACGCAAGCGTGATCAGCGACAAGGGTTCGCTGATCGTCGACGGCGTGCAAGACACCTCGCACAGCAACAATCATGACAAGGACAGCAAGTTCTTC GGCATCAGCAAGGACGAGTCGCGCCAGAACGCCAAGGACAGCACCACGGTGCGCAGCGAACTGGTGTCCGACAGCAACCTCAAGCTCAAAAGCGCCAAGG ACATCGAAGTGGCCGGCTCGACCGTCAAGGCGGGCGGCGCGTTGACGGCGGATGCGGCGGGGGATGTGAACGTGCATTCCGCGCAGAACAGCCACGACAG CAGCACCACGACGGAAACCCGTGGCTTCGATGCCTACGCCAAAGAGCAGACGCCAGAGCAATATCGCGCCGGGATTCATTACGAAGACAAGCAACAAACC GTGACCCGTAACGACGTGACCCAGCAAGGTTCCAGCCTCAGCGGCGGTAGCGTGCAAGTGAAGGCGGGCGGCGACGTGACCCTCAAGGGCGCGGACGTTA AATCCACCGCGGGCGACACGACGTTGAGCGGTAAAAACGTGTCGTTGCTGGCCGAGCAGGACAGTCACAAAACCTCCACCGACCAGTCCAGCACCGGCGG CGGTTTCTATTACACCGGCGGCCTCGATCGCGCCGGCAGTGGCATCGATTTCGCCCATAGCACCTCGCAAGACACCAGTAGCAAAACCACTGCGCAAACC ACCAGCGTGCAGAGCAGTGGCGGCCTGACGATCAACGCCGACAAGCTCGCCACCGAAGGCGCGCAACTGAAGGCCGGCAACGGTTTGAACATCGCGGCCA ACGAAGTCGATAACCGCGCGGCCAGCAACACCGAAAGCAGCACCCATAACCAGAGCAACTGGTCGGCGGACATCGGTGCCAACGTCGAGTACAAAGACAT CGCCCGGCCTATCGCTGGTGCGGTTAAAGATGTGCTGAACGCCAAGGTGCCGGACAAGGATGCACTGGCCAATCTCGGTCAGCCGAACGTCGGTATCGAC GTCGCGGTCGGTCACGGCAGCGCCGAGAAAACCGAGCAAGCCAGCAACGCTGTGGTCAGTCGTTTTGACGGCGGCACTGTCGACGTGAACGTCGCCGGAA CGCTGCACGACCAAGGCACGCAGTACAACGCCAGCGCCGGTAAAGTGAACATCAGCGCCGACAAACTGGTTGCCGATGCCGCGAGCAATACCCACGCCAG TACCGACAGCTCGGTGGATGCCAAAGTCGACGTGCGGGTCTACACCAAAACCGGCGAAGACGTGAATGTCGCCGGTAGCGGCGCGGGTGGCAGCAGCCAG TCGAGCAAGGACAGTTCCACGGCGGTGGTCGGCGCTTATGCCGGCAGCCAGGGTGTGAACATCAAGGTTGGTGGCGACGCGCAGTTCGAAGGCAGCCGTT TCGACGGCGGACAGGGCGGCGTGAACATCAAGACCGACGGCGATCTTGCGCTCAATCAGGCCAACGATCGCCAGAACAGCAGTGACGTCAGTCTGCGCGG CAATGGCTCGCTGACGGTTGGCACCTTGCCGGGCAGCGATGGCACCAACGTCGATCTCGGCGCCGGGTTCCAGCTCGACCACACCGGCAAGCAGACCTCT GACACTCAGGCCCATGTCGCAAGCATCACCGGCAACGGCCCGGTGCAACTGAGCAGCGGCGGCAATCAGGTCCAGCAAGGCACTACGATCGACAGCGCTG GCGCCATCGATCTGCATGCTGACGGCAAACTCGATCTGCAAGCAGCCACCGACACTCACACTGCCACCGGAAGCAATCTCGGCGGCGGCTTGAAGGGCGG CGGCAGCAAATCCGGCAGCGAGAAGAGCCGCGATCAGAGCGGCAATCTCAGTGGCAACTTCAACATCGGTCGGGTCAATGAGCACTCACAAACACTGACC GGTGGCCAAATCACCAGCCAGAGCGGGATTGCCCTAAGCGGTGACGCTGTTCATCTGCAAGGCACGCAAGTCAGTGCACCAAACGTCAACGTCGATGCAC AGAAGGGCGGCTACGTTCAGGAGTCGGCACAGTCCACTGAAAGCCGTAATAACTGGAATGTCGCACTGAATGCCGGCGGCAACCTGAGCAGCAAGAAACC GACAGCCGCCGATGAGAAGGCCAGCAGCGATCACGGCTTCAATGCCGGGGCCAAGGTTGGCGTGGATTACCTGCAGAGCACCACGCAGCAGAACAGCCAG ATCAAGGCTGACAGCGTGGTGTTGAACAGCGCAGGCGATGCAGAGTTGGCTGGCGCGCGAATCGATGCGAAGACTGTCAGCGGGAATATCGCAGGTGATC TGGCAGTCGCCAGCCGTCAGGACTCGAAGACAAGCGCCAAGGTTGACGTGGATCTGGGCCTGACCGCCAAGAAGAACCCACCGAACGACAAGGAGAAACT CGCCGGCACTGACTACAAACCGACGCTGAAAGCGCAGGGCGAATACGCGCACAAGAACAGCGTCGCGCAGGCGTCCGGCATCAGCGCCAGTCAAGGTGTA AAGCTGAATGTAGGCGGCGCGACACAACTGACCGGCGCGCGCATTTCGGCGAGTGACGGCAAGGTTGATCTGGGTGGTTCGAAGGTCAGCAGCACCGACC TGAACAATCGCGATTACGGCATCAAGGCTGGCCTGGATCTGCCACAAAAAACCGAGGAAAACGCGCCGAAGGTGTCGTTTGAGAACGGTGATCTGAAAGT CGGCCCGGTCACTTTGAGCGGGCATCTCGATACCCAAACCCTGCAGGCCGGAATCGACGAAAAAGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCCCGATACTCCCGTGTAGGAGCTGCCGCAGGCTGCGATCTTTTGATCTTGGAAAACCAGGATCAAAAGATCGCAGCGTGCCGCAGCTCCTACAGGGGGA TTTGCTTATGATCGGAATGATTTGCCGGTCTTAATAGTAACCATTACTATTCGCGCTCATTTCCTCAGCACACCACCCATACCCCCATGCGTCCCCGCAG ACCCGGCTTTTTCGAGCATTACGAAGAGTTGATCGGCACCTGGACTCGTCGCCTGCGCAATCGCGCGCAGGCCGAGGATCTGGCGCACGACACCTTTGTG CGGGTGCTTGAGTCCGATTCGGCAGAGGTGCAGCAACCCCGGGCGTATTTGCACCAGACCGCGCGCAATATTGCGGTCGATGGCTATCGGCGGGAGGATC GGCGCGGCGCCATGGAGTCGGAGGCGATCGATCACAGTGCGTCGTCATCCGGCGACCCGGAGCATTACATGCATGCGATCCAGTTGGCTGACTCCATCGA
Amino Acid Sequence
>filamentous hemagglutinin
MPAPTFAFHLSPRGKLRWAIASLFFAVHLPSALAGGVVVAPGPGGTAQLQTQGGVPIVNIVAPNGSGLSHNQFLDYNVDRQGLVLNNALQDGQSQLAGQL AANPQLQGQAASVILNEVISRNPSAINGAQEIFGRAADYVLANPNGISVNGGSFINTPNANLVVGRPELNDGKLQALNTRDASGQLQIQNGGLRNGEGSI NLIAPRIDSQGALNARDQLNLTVGRNQVDFASGQVKTVDPAGNTTDQRIDASLFGAMQAGRINIVSTAEGAGVRVGAVQVAGRDGVQIRSAGDLSVSGDA VANSLDVTRAGIRSSQGDVGLHSGKDLTLAATDVSGRDVSVDAKRNLTLSTVESRKLQEKRENWSNSTIGITWETYDRTQTDSESRQHGSQIIASRDATL SSGKDTQLNAAKVEAAKNLSVQSGGDLRLTAATESHTQTDQGNHRKHLWKANWNTSSEEQRSVTSQLKAGNIALQTAALLRSEGAELNSAGDLQLAGKQV EITTATRTDRSNDNRYSGDLVGGGFFGKTGDADKGQTQHQGSKVNAAGKLIVKADDVRISGSQVRGGTDASVISDKGSLIVDGVQDTSHSNNHDKDSKFF GISKDESRQNAKDSTTVRSELVSDSNLKLKSAKDIEVAGSTVKAGGALTADAAGDVNVHSAQNSHDSSTTTETRGFDAYAKEQTPEQYRAGIHYEDKQQT VTRNDVTQQGSSLSGGSVQVKAGGDVTLKGADVKSTAGDTTLSGKNVSLLAEQDSHKTSTDQSSTGGGFYYTGGLDRAGSGIDFAHSTSQDTSSKTTAQT TSVQSSGGLTINADKLATEGAQLKAGNGLNIAANEVDNRAASNTESSTHNQSNWSADIGANVEYKDIARPIAGAVKDVLNAKVPDKDALANLGQPNVGID VAVGHGSAEKTEQASNAVVSRFDGGTVDVNVAGTLHDQGTQYNASAGKVNISADKLVADAASNTHASTDSSVDAKVDVRVYTKTGEDVNVAGSGAGGSSQ SSKDSSTAVVGAYAGSQGVNIKVGGDAQFEGSRFDGGQGGVNIKTDGDLALNQANDRQNSSDVSLRGNGSLTVGTLPGSDGTNVDLGAGFQLDHTGKQTS DTQAHVASITGNGPVQLSSGGNQVQQGTTIDSAGAIDLHADGKLDLQAATDTHTATGSNLGGGLKGGGSKSGSEKSRDQSGNLSGNFNIGRVNEHSQTLT GGQITSQSGIALSGDAVHLQGTQVSAPNVNVDAQKGGYVQESAQSTESRNNWNVALNAGGNLSSKKPTAADEKASSDHGFNAGAKVGVDYLQSTTQQNSQ IKADSVVLNSAGDAELAGARIDAKTVSGNIAGDLAVASRQDSKTSAKVDVDLGLTAKKNPPNDKEKLAGTDYKPTLKAQGEYAHKNSVAQASGISASQGV KLNVGGATQLTGARISASDGKVDLGGSKVSSTDLNNRDYGIKAGLDLPQKTEENAPKVSFENGDLKVGPVTLSGHLDTQTLQAGIDEKG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site