Pseudomonas fluorescens AU11114, AA065_RS03560

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU11114 Contig_2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCTGACCGGCGTTGCCAGCCGCTACGTTGGCCTTTACATCGGCGCGATCCTGTTTTGTCTCGGCCTGTTTCCAATGATTGGTGCGGTGCTGCAACAGATA CCGAAACCAGTACTCGGCGGCGCCACTCTGGTTATGTTCGGTGCCGTCGCCGCTGCCGGTGTGCGCATCCTCGCGCAGTCGCCGCTGGATCGGCGCAGCA TGCTGATCATCGCCACTTCGTTCGGCGTCGGCCTGGGCATCGCCGCACAACCGAACCTGCTGCACCTGCTACCCAAACTGGTGCAAAACCTGTTCGACTC GGCGATTACCAGCGGCGGGCTGACGGCAATCATCCTTTGCCTGCTGCTGCCGGAAGCCAAAACAGCACCCGCTGAAGTGCAAGTGCCGCTGAACAAGATC GAACAGGCGTAACGGTTTTATCGCCTGAGGACTTGTCGGATGCTTGTGGGTGCGCTATCAACGCAATTGGTTGCACCCACAGACAAACCCGGAAGTGCCT
DNA Sequence for Gene
>AA065_RS03560
ATGACCTTTGAAGTCCCCGCTCACGGCGGCAAGCCCGCCAGCCGCATTCGTCAGAAGAACGAAGAGACCATTCTCAAAGCCGCCGAAGACGAGTTCGCCC GCCACGGGTACAAAGGCACCAGCATGAACACCATCGCCCAGAATGCCGGGTTGCCCAAGGCTAACCTGCATTACTACTTCACCAACAAGTTGGGGCTGTA CGTGGCGGTGCTGAGCAACATCATCGAGTTGTGGGACAGCACCTTCAACACCCTCACCGCCGAAGACGATCCGGCCGAAGCGCTGACCCGCTACATCCGC GCCAAAATGGAATACTCCCGTCGCCAGCCACAAGCCTCGCGAATCTTTGCGATGGAAGTGATCAGCGGCGGCGAATGCCTGAGCGAGTATTTCAATCAGG ATTACCGCGCCTGGTTCCAGGGCCGCGCGGCGGTGTTTCAGGCGTGGATCGATGCCGGCAAAATGGACCCGGTCGACCCGGTGCACCTGATCTTCCTGTT GTGGGGCAGCACCCAGCACTACGCCGACTTCGCCACGCAGATCTGCCGCGTCAGCGGGCGCAGCAAGTTGACCAAGCAGGACATGGAAGACGCCAGCAAC AACCTGATCCGCATCATTCTCAAAGGCTGCGGCCTCACTCCTTCTCTATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GACGTTTATGCCTTTCACCCTCAGCGGTTTTTGCGAGTACCGCGAAGAGATTCGCAAAAGCCGCTTTATCACTTTCGCGGCCCCCATCAGCAGTCCCGCT GACGCGCAGGCGTTCTTCGAACAGCACAGCGACTTGAACGCCTCGCACAATTGCTGGGCGTGGAAACTCGGCGATCAATATCGCAGCAATGACGACGGCG AACCGGGCGGCACGGCCGGGCGACCGATTCTGGCAGCGATTGAAGCGCAGGATTGCGATCAGGTCGCGGTGCTGGTGATCCGCTGGTACGGCGGCATTCA GCTGGGCACCGGCGGTTTGGCGCGAGCCTATGGTGGTGGTGCGAACAAGTGCCTGCAAACGGCGGCGAAAGTCGAGTTGATCAGCCGCGTGCCCTTGCGT TGTGCCTGCGGCTTTGCCGAGTTGGCGTTGGTGAAGCTGCGGGTGGCGGATCTGGGCGGACTGGTAGTTGAGGAGCAGTTCACCGCCAATGGTGTTGAGT
Amino Acid Sequence
>TetR family transcriptional regulator
MTFEVPAHGGKPASRIRQKNEETILKAAEDEFARHGYKGTSMNTIAQNAGLPKANLHYYFTNKLGLYVAVLSNIIELWDSTFNTLTAEDDPAEALTRYIR AKMEYSRRQPQASRIFAMEVISGGECLSEYFNQDYRAWFQGRAAVFQAWIDAGKMDPVDPVHLIFLLWGSTQHYADFATQICRVSGRSKLTKQDMEDASN NLIRIILKGCGLTPSL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site