Pseudomonas fluorescens AU11114, AA065_RS09735
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU11114 Contig_17, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGGTTTTCAGCCAGGCTTCAACAGCTGCGCGCTGCTCTTCGTTGACCGAGCCACGCTTCTGCAGGCATACCAGACCGAAGTCGTCGCCGCCAACATAAC CCAGACCATTGGCTTCCATGGCTTCTTTGATGAAGGCTTCGAGGAAAGCGTCAATGGCTTCTTCGGACAAGTCTTCTTTGAAGTCCAGGTTCAGCTCGAA ACCCAGCTCTTGAAATTCATCAACGCACAGTTTTTTGCGCAGACGCTGGGAACGGTTAGTCGCCATTGGAACAATCCTCTTAAGTAATAACGGCCGGCAC TTTACCAGTTTAAGACGTCATTTGCCCGACTCTCTGGACACTGCGGCCGACCGCCTGTAAAAAAATCACTGATTAGCCACCCCGGGGACGGCACAAGCGG TTACACCTTGGGGCATAATGCCGACACTTTCGTGACCACTGAGGGCTTTTTCATCCATGTCCTCGTTTTTCTCCCCCTCTTTTGCAGGGTTTTATTTCAC
|
|
| DNA Sequence for Gene |
>AA065_RS09735
ATGATCAAATCGTTGCGTCCACTTTTTTTCGCCGGCCTATTTCTTCCTCTGGCCCTGCCTGCCTCTGCTGCCCCTATCAATACTGCCCTGACCCCCAATG TCGAAAAAGCCCTCAAGGCGAGCAAACTGCAGCCTAACGCCCTGTCGCTGGTAATGGTGCCGCTCGATGGCCCAGGCACAGCCACCGTGTTCAACGCCGA TGTGTCGGTCAACCCGGCCTCGACCATGAAACTGGTTACCACCTACGCGGCGCTGGAAATGCTCGGCCCCAACCACCAGTGGAAAACCGAGTTCTACACC GATGGCAACCTGAGCGGCGGTATCCTCAACGGTAACCTCTACCTCAAGGGTGGCGGCGATCCGAAGCTGAACATGGAAAAACTCTGGCTGTTGATGCGCG ATCTGCGCGCCAACGGCGTCACGCAGATCACCGGTGATCTGGTGCTGGACCGCAATTTCTTCGTGCAGCCACAGCTGCCGGAATTCAACGATGACGGCAA TGACGAGAACAAGCCGTTTCTGGTCAAACCCGACTCGCTGCTGGTCAACCTCAAGGCCCTGCGCTTCGTCGCCCGCAATGACGGTGGCCGGGTGCTGATC TCGGTGGAACCGCCGATCGCCAGCATCCGCATCGAAAATACCGTTAAAGCGCTCCCCTCCAAGCAATGCACCGGCGGTGTGCGCTACAACCCGGTGCCAC AGCCCGATGGCAGCGTGACCGTGACGGTGGGCGGCCAGTTGGGTGAAGGTTGCAGCTCGCAGACGTACCTGTCGTTGCTCGACCACGCGACCTACACCGC GGGCGCCGTTCGTGCGATCTGGAAGGAGTTGGGTGGCAGCATTCAGGGCAGGGATCGTCTCGCGCCGACCCCGAGCAACGCCAAATTGCTGGCTCGCGCA TTCTCGCCGGATCTGGCGGAAATCATCCGCGACATCAACAAATACAGTAACAACACCATGGCTCAGCAGCTGTTCCTGAGCCTGGGTCAGAGGTTCCGCA ACGACGCCGACGGTGACGACGCCAGGGCAGCGCAGCGCGTAGTCCGTCAGTGGCTGGCGAAAAAAGGCATTACCGCACCGCACCTGGTGATGGAGAACGG TTCCGGCCTGTCCCGTGCCGAACGGGTCAGCGCCCGTGAGATGGCGAACATGCTGCAAGCCGCCTGGCACAGCCCGTATGCTGCCGAGTACATCAGCTCG TTGCCGATTGCCGGCACCGACGGCACCATGCGCAAACGCCTGAAGACCACCGCCATGCGCGGCGAAGCCCACGTCAAGACCGGCACCCTGAACACCGTGC GAGCGATTGCCGGTTTCAGCCGCGACGTCAACGGCAACACTTGGGCGGTGGTGGCGATCCTCAACGACAAAGCGCCGTTTGGTGCATCGTCGGTGCTGGA TCAGGTGCTGCTGGATCTGTATCGCCAGCCGAAGCTGCCGCAGACGGCTTCCGTCTTGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCCAGTCCCGCCAACACCCTAAAACCCTGTGGGAGCTGGCTTGCCAGCGATATCGTCAGGTCAGTCACCAAAGATTCTGACTGAACTGACGCTATCGCGG GCAAGCCCGGCTCCCACAGGGTTTGTGCTGTGTTCAATATCAATTCATCTGCCGCTCAACCCGATCCCGCCCGCCCTGCTTCGCCGCGTACACCCCGTAG TCCGCGCGCAGCAACAGCGAATCAGCGCCCTCCCCCGGTCGCCAACTGGCGATACCGAAACTTGCGGTCACCACGCCGACCACATCAACCGGTGCACTGC GCAACCCCTGCCACAACTCCACAGCGAGCATGTACGCGTGTTCACCGTCGATGTCCGGGCAGAGCACCATGAATTCCTCGCCACCCAAGCGACAGAACAC ATCCGTGCGACGCAAGCGATGGCCGATGCGCTCGCACACGGCTTGCAGCACCCGGTCGCCCACGGCATGACCGTGCTGGTCGTTGATCCGTTTGAAATGG
|
|
| Amino Acid Sequence |
>D-alanyl-D-alanine carboxypeptidase
MIKSLRPLFFAGLFLPLALPASAAPINTALTPNVEKALKASKLQPNALSLVMVPLDGPGTATVFNADVSVNPASTMKLVTTYAALEMLGPNHQWKTEFYT DGNLSGGILNGNLYLKGGGDPKLNMEKLWLLMRDLRANGVTQITGDLVLDRNFFVQPQLPEFNDDGNDENKPFLVKPDSLLVNLKALRFVARNDGGRVLI SVEPPIASIRIENTVKALPSKQCTGGVRYNPVPQPDGSVTVTVGGQLGEGCSSQTYLSLLDHATYTAGAVRAIWKELGGSIQGRDRLAPTPSNAKLLARA FSPDLAEIIRDINKYSNNTMAQQLFLSLGQRFRNDADGDDARAAQRVVRQWLAKKGITAPHLVMENGSGLSRAERVSAREMANMLQAAWHSPYAAEYISS LPIAGTDGTMRKRLKTTAMRGEAHVKTGTLNTVRAIAGFSRDVNGNTWAVVAILNDKAPFGASSVLDQVLLDLYRQPKLPQTASVL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|