Pseudomonas fluorescens AU11114, AA065_RS27185

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU11114 Contig_12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTGCTGCGTCAGAGCGTCGGCGGTTTGCAGCAGAGCCTGCGTACCCGCTCGGAGCTGAAAAACGAACTGCGTCTGGCCCAGACCACCGTGCAAGGCACCA ACAAGAACCCGCTGAAATTCGCCGTTGATCCGAGCGAAGCGCTGGAAATTCTGTTGCAGCCAAGCAAGCCTGGGCATCTGCCGGCCGAGCAAGCCATCTC CCGCGCGTTCCGCGATTTGCAGGCGCATCAAGTGGCACTGCTGACCGCCAGCCGCGCCGCCGTGCGCGGCACGCTGGAGCACTTCTCGCCCGAGCAACTG ACCTTGCGTTTCGAACGCGACAGCAAGCCGCTGATCGCGACGTCCGGCGGGCGCTGGAGAGCGTTTGGTCGTTATCACCAGGCGCTGCGTCAGGACGATG ACTGGAGCGAGCGTCTGCTGGCCCGCGACTTCGCCCAGGCTTACGAAGAACAGATCCGCCTGATCTCCACCCTCCACACCGACCACCAAGGATGATGCGC
DNA Sequence for Gene
>AA065_RS27185
ATGTCTCGCCGTTCGACCGCTTTTTTCAAGACGCTGACTGCGCTCACCGTGCTGGTGCTGCTCGCCGGTTGCTCGTCGCTGTCGCCGTACTCGAAAGTGA CCAAGATCAACCTGAAGCTGACCGGCAGCGATCAGCTCAACCCGGACCTCAACGGTCGCCCGTCGCCGATTGTGGTGCGCCTGTTCGAACTCAAGCACCC GGTGACGTTCGAGAATGCCGATTTCTTCAGCCTTTACGAGCGCGCCAAGGAATCCCTCAACCCGGATCTGGTGGCCAGCGAAGAACTCGAACTGCGCCCG GGTGAAACCGTGGAAATGAAGCTCAAGGTGGAAGAGGGCAGCCTTTATGTTGGCGTTCTCGCCGCTTACCGCGACTTGCCGGAAAGCCAATGGCGCTACA CGGTGCAGATCACTCCGCTGGAAGTCACCGAAGTCGATCTGACTCTGGACCAGACCGGCATCCGCAACACAAATCAAGTGCTCGCCAAGGCGGATGACTG A
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCATGAATACCCATAAAGTCATTTGGCAGGAAGGCATGCTGCTGCGTCCGCAGCACTTCCAGCACAACGATCGCTATTACGATCACCAGATGAAAACCCG CACCCAATTGCTGGGTGGCTACACCTGGGGTTTCCTCAATCTGGAGATCGACTTGCAGTTCCTCAACATGGGCAAACTGGTGATCAGTGAAGCCTCGGGG ATTTTGCCGGACGGCAGCCTGTTCGAACTCGGCGGCAACACCGAACCGCTGGCGCTGGATGTGCCGCCGAACACCGGCAACACGCCGATCTATCTGGCGC TGCCGCTGGTCACGGGTAACCACATCGAGTCGCGCCGTCCGGAGCAATCTGATGTGCTGGCGCGTTACACCGCGTATGACGCCGAAGTGGCCGACTCCAA CGCCGGCGACGATTCCGCCAGCCAGGTCAGCTGTGGTCGCCCGGACTTCAAACTGTTGCTCGGCGAGCAGCAGAGCGATCAGGCCTACGTGAAGCTGAAG
Amino Acid Sequence
>type VI secretion protein
MSRRSTAFFKTLTALTVLVLLAGCSSLSPYSKVTKINLKLTGSDQLNPDLNGRPSPIVVRLFELKHPVTFENADFFSLYERAKESLNPDLVASEELELRP GETVEMKLKVEEGSLYVGVLAAYRDLPESQWRYTVQITPLEVTEVDLTLDQTGIRNTNQVLAKADD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site