Strain | Pseudomonas fluorescens strain AU5633 Contig_8, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCCTGTTCGACGGCTTCCCGCGCACCATTCCGCAAGCCGAAGCCCTGGTGACTGCCGGTGTCGAACTGGACGCCGTGGTTGAAATCGCTGTTGAAGACGA AGAAATCGTTCAGCGTATCGCCGGTCGTCGCGTTCACGAGGCCAGCGGCCGCGTTTACCACATCGTCTACAACCCGCCGAAAGTGGCTGGCAAAGACGAC GTTACCGGCGACGATCTGGTGCAGCGCAAGGACGACACCGAAGAAACCGTGCGTCATCGCCTGTCGGTCTACCATTCGCAGACCAAGCCGCTGGTGGATT TCTACCAGAAGCTCTCCGCTGCCAACGGCAAGCCGAAGTACAGCCACATCCCGGGCGTTGGCTCGGTTGAAGCGATCACCGCCAAGGTGCTCGAAGCGCT GAGCTGAAAAAGCCGATCCGCTGCATCATCCACGGCCCGCTTGCGGGCCGTAGTTGTTTATACTGACGCCCTTTTTCTCCCACCTGTTTTGGAAACATCG
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DNA Sequence for Gene |
>AA066_RS08395
ATGAGCACCTTGCTGGCCCTGGACACCGCGACCGAAGCTTGCTCCGTTGCCTTGCTGCATGACGGCAAGGTCACGAGCCATTACGAGGTGATCCCGCGTC TGCACGCGCAGAAGCTGCTGCCGATGATCCAGCAACTGCTGGCCGACGCCGGCACCACGTTGCAAGCGGTGGACGCCATTGCCTTCGGTCGTGGGCCGGG GGCGTTTACCGGTGTGCGGATCGCCATTGGTGTGGTGCAAGGTCTGGCCTTTGCGCTGGATCGCCCGGTGCTGCCGGTGTCGAACCTGGCGGTGCTGGCA CAGCGCGCGTATCGCGAACACGGTGTGAGCCAGGTCGCGGCGGCCATCGATGCGCGGATGGATGAAGTGTATTGGGGCTGCTACCGCGAGACCGCCGGCG AGATGCGTCTGGTGGGTGTCGAAGCGGTGCTGCCACCGGAAGCCGCGGCGCTGCCGGTCGATGCCAGCGGCGATTGGTTCGGTGCGGGCACCGGTTGGGG CTATGGCGAGCGGATCGCGGTCAGCCTGAGCGGCTCGAATGCCGGCATGCTGCCTCACGCCGAAGACCTGCTGACCCTGGCGCGGTTTGCCTGGGAACGC GGTGAGTCGATCCCTGCCGATGATGCGCAACCGGTTTACCTGCGCGACAAAGTCGCTACTCCAAAGGCTCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTCCTGACTTCTAGCGGGGTAGCTTCTGTGGTGAGGGGATTTATCCCCGATCGGCTGCGAAGCAGTCGCCGATTTTGGGGCCGCTTCGCGACCCATCGGG GATGAATCCCCTCACCACATAAGGCTCTCCACAATCCCACTGCTTATTCCAAATTCTGCCAATCGTCAGTTTCCAACCCCGCGCTTTAAACCTTTTACGC TTTATGTGTTCTAGTTATCACTCGGCGGTTTGCTAAGTCGGTCAAGTGCCGCTAAATTGCCATCATCGATACCGAGCATGAAATTATGCGTATAGACGGC CTTTCCTCTCAGTCCTACCCCATCAAGCGCAAGCCTCGCAAAGGCAATGTGGCGCTGGATGAGTCCGTCGACGATATCGATGGCGAGCTGGAATTCCCGA CTGAAGAGCAACTGGCCGCCCGCGCTGCCAAAGCCTCCGCACAACGTCTGGCCAATCTGCCTGCCCGTCAGCAAGACATGATTTATCACCGCGCCATGAG
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Amino Acid Sequence |
>peptidase M22
MSTLLALDTATEACSVALLHDGKVTSHYEVIPRLHAQKLLPMIQQLLADAGTTLQAVDAIAFGRGPGAFTGVRIAIGVVQGLAFALDRPVLPVSNLAVLA QRAYREHGVSQVAAAIDARMDEVYWGCYRETAGEMRLVGVEAVLPPEAAALPVDASGDWFGAGTGWGYGERIAVSLSGSNAGMLPHAEDLLTLARFAWER GESIPADDAQPVYLRDKVATPKAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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