Pseudomonas fluorescens AU5633, AA066_RS08295
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU5633 Contig_8, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGGAAATGTACATCGCCAGCGTGATGCTGGTGGATGAGGAGAGCTTTATGGAAAAGGCGTATCTGGAGGAACTGGCCAAGCAACTGAAGCTGGAGCCG GGGTTGAAGGTAGAACTGGAGAAGCAGGTGCGCCTGGCATCGCAATAGAACTGCCTGAACACGGTATTCATGTAGGAGCTGCGGTACGCTGCGATCTTTT GATTTTTTAAGCCAACAGCAAAAGATCGCAGCGTGCCGCAGCTCCTACAAGGTTTTGGGCCAGACGCCGAAGCCTGCTCACGATTGCGTTTTCAGCCGCG CATCCACAGCAATGGCCGATCCAGCGCCCCTTTTTGCCGTTCCGGCACTGGCACGCCAGCCCCCGATTGTCGGACAGTCCCACCCCAGAGCCTCCCGGCC ATCCATGCCTGGCAGGCCCGAGGGTTAAAAAGCGTCTTATAAATGAAACACCGCCCTCGGCTATACTCCCCGCATTTCGACTTAGGCACGAGGAATCACT
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| DNA Sequence for Gene |
>AA066_RS08295
GTGAAGAACTGGACGTTGCGCCAACGCATTTTGGCGAGCTTTGCGGTGATTATCGCCATCATGTTGCTGATGGTCGTTGTTTCGTATTCCCGCCTGCTGA AAATCGAAGCCAGTGAAAGCAGCGTGCGTGATGACGCCGTTCCCGGCGTCTATTACAGCTCGATGATTCGCGGTGCGTGGGTCGACAGTTACCTGCAGAC CCAGGAACTGCTGGGGCTCAAGGAGGGGCAGGGCATCAGCAGTGAAGATGCGGCGGACTACAAGGCGTTCGAGACGCGCCTGCAAGAGCAGATGGCCAAC TATCGCAGCACCGTCACCACCGACGAAGACCGGGTCGAGTTCGCTGCGTTCGAGAAGGATCACGACACCTACATGCAGATTCAGGATCAGGTACTCGATC TGCACAAGCGCAATCTCGAAGCCGAGGCGGTCAAGCTGTTTACCGAGAAGCTGACCCCGGCCTGGTACACCGGCCGCATGAAACTCAACGACATCATCGG TGAGAACAAGCGGGTCGCCGATCAGGCCATGGCCAACATCGACGAGGCGGTAGCGGCGGCCAAGGTCAGCATGTTTGTCTCGCTGCTGGTGGCCGTGCTG GCGGCAGGTGCCTGTGGCCTGCTGCTGATGCGTGCAATCATGGCGCCGATGAACCGCATCGTGAAGATCCTCGAAATCATGCGCACCGGTGACTTGAGCA GCCGTCTGAATCTGGATCGCAAGGACGAGTTCGGCGCGGTGGAAACCGGCTTCAACGACATGATGACCGAGCTGACCTCGCTGGTGTCTCAGGCCCAGCG TTCGTCGGTGCAGGTGACCACCTCGGTGACCGAGATCGCCGCCACATCGAAGCAGCAACAGGCCACCGCCACCGAAACCGCCGCCACCACCACCGAAATC GGCGCGACCTCGCGGGAAATCGCCGCCACCTCGCGGGATCTGGTGCGCACCATGACCGAAGTGTCCACCGCCGCCGATCAGGCCTCGGTGCTCGCCGGGT CCGGCCAGCAAGGCCTGGCGCGCATGGAAGACACCATGCACTCGGTGATGGGCGCGGCTGACCTGGTCAACGCGAAACTGGCGATCCTCAACGAGAAGGC CGGCAACATCAATCAGGTGGTGGTGACCATCGTCAAGGTTGCCGACCAGACCAACCTGCTGTCGCTCAACGCCGCCATCGAGGCCGAGAAGGCCGGTGAG TACGGCCGTGGTTTTGCCGTGGTCGCCACCGAAGTGCGGCGTCTGGCGGATCAGACCGCCGTCGCCACGTATGACATTGAACAGATGGTCCGCGAGATCC AGTCGGCGGTGTCTGCCGGTGTGATGGGCATGGACAAGTTCTCCGAAGAAGTGCGCCGGGGCATGGCCGAAGTGCAGCAGGTCGGCGAGCAACTGTCGCA GATCATCCACCAGGTGCAGGCGCTGGCGCCGCGGGTGTTGATGGTCAACGAAGGCATGCAGGCCCAGGCCACCGGTGCCGAACAGATCAACCATGCGCTG GTGCAGTTGGGCGACGCCAGCAGCCAGACCGTCGAGTCGTTGCGTCAGGCCAGTTTCGCCATCGACGAACTGAGCCAGGTGGCCGTCGGGCTGCGCAGTG GCGTTTCGCGATTCAAAGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGAGCGAAATCACTGCCAAACGCAGCGCTGCGCCAGTGGCCAGACAGGCGCTGTTTCTGCTGTTTCGCATCGGCAACGAACGCTATGCATTGCGCGCCAC TGAAGTGGCGGAGGTTCTGCCGCGCGTACCGTTGAAGCCAATTGCCCAGGCGCCGAAGTGGGTCGCCGGGGTGTTCGCCTATCGTGGTGCGGTGGTGCCG GCGATCGACCTCAGCGCGTTGACCTTTGGTCAACCGGCCGAGGCGCGCACCAGCACCCGGCTGGTGCTGGTGCATTACCGCCCGGATGCACTGCAGCGGT CGCACTGGCTCGGGCTGATCCTTGAGCAGGCGACCGACACCCTGCGCTGCAATCCCGAGGATTTTCAGCCATATGGCCTGGACAATCGTCAGGCGCCGTA CCTCGGCCCGGTGCGCGAAGATGCCCAGGGGCTGGTGCAGTGGGTGCGGGTCAACGATTTGCTGGATGACGCCGTGCGCAGCCTGCTCTTTCCCGCGCCG
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| Amino Acid Sequence |
>chemotaxis protein
MKNWTLRQRILASFAVIIAIMLLMVVVSYSRLLKIEASESSVRDDAVPGVYYSSMIRGAWVDSYLQTQELLGLKEGQGISSEDAADYKAFETRLQEQMAN YRSTVTTDEDRVEFAAFEKDHDTYMQIQDQVLDLHKRNLEAEAVKLFTEKLTPAWYTGRMKLNDIIGENKRVADQAMANIDEAVAAAKVSMFVSLLVAVL AAGACGLLLMRAIMAPMNRIVKILEIMRTGDLSSRLNLDRKDEFGAVETGFNDMMTELTSLVSQAQRSSVQVTTSVTEIAATSKQQQATATETAATTTEI GATSREIAATSRDLVRTMTEVSTAADQASVLAGSGQQGLARMEDTMHSVMGAADLVNAKLAILNEKAGNINQVVVTIVKVADQTNLLSLNAAIEAEKAGE YGRGFAVVATEVRRLADQTAVATYDIEQMVREIQSAVSAGVMGMDKFSEEVRRGMAEVQQVGEQLSQIIHQVQALAPRVLMVNEGMQAQATGAEQINHAL VQLGDASSQTVESLRQASFAIDELSQVAVGLRSGVSRFKV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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