Pseudomonas fluorescens AU5633, AA066_RS13230

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU5633 Contig_51, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAGGTTGCGATAAATGCCGTTGAGGCGATTGATTTCGCGGTCCTTGTTGGCGATCAGGGTCGCCCAGTCGAAACTGGCTTCACCCAGACTCCAGCCGAAA CCGGACGACTGCTCGAAGTCTTCGGCGAAATGCGCGCCGTACACCAGCAGTTTCTTCGGCACGCAGCCGACGTTGACGCAGGTACCGCCCAGATAACGAC TCTCGGCCACCGCCACTTTCGCGCCGAAACCGGCCGCGAAGCGCGCTGCACGTACACCGCCGGAACCGGCACCAATCACATAAAGGTCAAAATCGTAGGC CATTGCTATCTCCTCGGCAGGCCAACAGCATACCCGCCACCGTCCATTGGGCAAGCGCCGTGCGCAGCTTTTCGCCCGCCTCGGCGAAGTCGGGAAACTT CTCCAAATAATAATATTTCTTGTTTGATACTAAATCGTCGGGCTGCACCTCGTCTTTGAACCAACGGATTTTTTCCCTCGAAGACAAGGAGTCGGCTGCG
DNA Sequence for Gene
>AA066_RS13230
ATGTTCGCGCCCATTACCCGTTCCATGACCTTGACTGTCGGCTTGTTCAGCATGGCGTTGAGTCCCGATCTGCTGGCTGAAACCGACCCTGAAACAGCGC CACAATCCGCCACCCAGGCGCTGGAACTGGACGCCACCAGCGTCAGCGCTGAAGGCCTCGGCCTCAATACCGAAAACACTCATTCCTACACCACCGGCGC GATGAGCACCGCAACGCGGCTGAACCTGTCGATCAAGGAAACCCCGCAATCGGTGTCCGTGGTCACGCGCCAGCAGATGGATGATTTCAAGCTCGGTACA TTGTCCGAAGCCATGCGTCAGACCACCGGTATTGTCGTGCAACACAACGACTCGGACCGAGTCAGCTATTCGGCGCGGGGTTACCCGATCAACAATTTCC AGATCGACGGCATGCTCAACACCTTCGGGCGCATGAAGTCGGATTCGGACACCATCATCTACGACCGCATCGAAGTGGTCCGCGGCGCGACCGGCCTCAC CACCGGCGCCGGTGATCCCTCCGCCACCATCAACATGGTGCGCAAACGCCCGACTGCCCAGTGGCAGACACTGGCCGGTGTCAGCGGCGGCAGCTACGAC AATTACTACAGCTATGTCGATGTCGGTGGGCCGCTGGCTTTCGACGGCCGGCTGCGCGGGCGCACGGTGCTGGCCTATCGTGACAGCCAGTCGTTCCGTG ACAAATACGCGCTGCAACGCGAGGTCGGCTACGGCATTCTCGAAGCTGATCTGACCGATTCCACGGTGCTAGCCGTCGGTTACGACTATCAGGACAAGCA GGTACAAGGCACCTCCTGGGGCACCGTGCCGTACTGGAACGCCGACGGCAGCAAGGCGGGCCTTGGCCGGTCGACGAACATGGCGACCTCCTGGAGTTCC TGGCCGCTGAAGGACAAGACCGCATTCGTCACCCTGGACCAGCAATTGGGTGATGGCTGGAAGCTGAAAGCGGCCTACACCCACCGCGAGAGTGATACCG ACGGCAAGGTTTATTACGGCGGCAGCGGATTCCCCGAGGCCGACCGCAGCGGCATGACGGCCTACATGGGGCACATGCTTGGCACGCAGAAAATGAGCGT GTACGACTTCAACCTGTCGGGGCCGTACCAATTGTTCGGCCGCGAACACGAGATGATGTTCGGCTACGGCGAGGCGGAAAACCGCTCGACTTCGCCCTAC GCCTTCAACAGCCCCCAAGCCGCGGACTACGGCAAGATCCGCGACTGGAAATACATGGGTGACATCGGCAAGTTCGCCGACACCGTTACCGGCCTGCCGG GCGCGCGCGGCATCACTCGGCAAAAGGCCGGTTACCTCGCGACCCGCCTGAGCCTGACCGATGAGCTGCATGCCGTCATCGGCAGCCGCTATGGCAGCTG GGACGAATCCAGCACCGATTACTACTATGACGCGCAGCAAAAACTGACCAGCACCGATGCCACCCATCAGCGTCAGAACGATATCTGGACGCCCTACGCC GGCCTGCTTTATGACCTGACGCCGGAGTACACGGCTTACGTCAGCTACACCGACATTTTCAAACCGCAGAGTAAACGCGACAGCAACCGCAATTACCTCG ACCCCGTGGTTGGCAGCAACTACGAAGTCGGGCTCAAGGGCAGCCTGCTCGACGAACGCCTGAACCTGGCGACGGCAGTGTTCTGGAGCAAACAGGACAA CGTCGCCGAGCGCGACAACTCGGTGCCCCCAGACCCGGTGAGTGGCGAGGAGTTTTTCAAGTCCGGCGGCAAGGGCAACAAGGTCAATGGCTTCGAGGCC GAGGTGTCCGGCGAAATCCTCAATGGCTGGAACATGACCGCCGGCTACACCTACACCCATTCCGTCGACGGTGAAAAACAGCGCAGCAACACCGCTCAAC CGCTGAACATGCTGCGGCTGTCCACGGCCTATCGCTTGCCGGGCAACTGGCACGCACTGACTGTTGGTGGCGCGGTGAACTGGCAGAGCGACGTCTATGG CGCAGCCAACCGCCCGGTCGGGCGCGGCGCCAACGGCCGGATCATCACCGAACCGGCGCGGATCACTCAGCAGGCCTACAGCGTGGTCAAGCTGATGTCA CGTTATGAATTCGACAAGCACCTGTCGGCTTCGCTGAACGTCGATAACCTGTTCGACAAGAAGTATTACGACAACGTCGGTTTCTACAACGGCGTGTACT GGGGCGACCCGCGCACGGTGACGCTGAGCCTGGACTGGAAGCTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGAACAGGCTCAATAAAACCCCTGTGGCGAGGGGATTCATCCCCGATGGGTCGCGTAGCGACCCCACGCTCGAGGTGGCACGCAATGCGTCACCCAATC CCTCACCACCGCTGTTAACCCCGAGTTAATGCCGCGCCGGGACACTGTGCCCCGAGATCTGCTTCATGGACGAACGGCTCCCACGTTTTTCAGTAGGAGG CACCATGAAAACCACCACCGTCATTCTTGCCGGGCTACTCGCCCTCGGTTCTGCCAGCGCCTTTGCCGAGGGCGGCGCCGAACGCATGCGGCATTACTAC GACAACTTCCCGGTCCACCCCGCGCCAAGCGAACAACCGACCGACAGCAAAGCAGCGGAACTGCAGGTTCCGGACGATCAGACCGCGCAAGTCACCGAGT CTTATCGCAACTGATTCAACGAGCAACCGATGGACCTCCGATGGCTCCGCTCTGGCCTCGGAGACGACAGTTGGGCGCCCTGTGTGGGGCGCCTTTTTTT
Amino Acid Sequence
>TonB-dependent receptor
MFAPITRSMTLTVGLFSMALSPDLLAETDPETAPQSATQALELDATSVSAEGLGLNTENTHSYTTGAMSTATRLNLSIKETPQSVSVVTRQQMDDFKLGT LSEAMRQTTGIVVQHNDSDRVSYSARGYPINNFQIDGMLNTFGRMKSDSDTIIYDRIEVVRGATGLTTGAGDPSATINMVRKRPTAQWQTLAGVSGGSYD NYYSYVDVGGPLAFDGRLRGRTVLAYRDSQSFRDKYALQREVGYGILEADLTDSTVLAVGYDYQDKQVQGTSWGTVPYWNADGSKAGLGRSTNMATSWSS WPLKDKTAFVTLDQQLGDGWKLKAAYTHRESDTDGKVYYGGSGFPEADRSGMTAYMGHMLGTQKMSVYDFNLSGPYQLFGREHEMMFGYGEAENRSTSPY AFNSPQAADYGKIRDWKYMGDIGKFADTVTGLPGARGITRQKAGYLATRLSLTDELHAVIGSRYGSWDESSTDYYYDAQQKLTSTDATHQRQNDIWTPYA GLLYDLTPEYTAYVSYTDIFKPQSKRDSNRNYLDPVVGSNYEVGLKGSLLDERLNLATAVFWSKQDNVAERDNSVPPDPVSGEEFFKSGGKGNKVNGFEA EVSGEILNGWNMTAGYTYTHSVDGEKQRSNTAQPLNMLRLSTAYRLPGNWHALTVGGAVNWQSDVYGAANRPVGRGANGRIITEPARITQQAYSVVKLMS RYEFDKHLSASLNVDNLFDKKYYDNVGFYNGVYWGDPRTVTLSLDWKL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site