Strain | Pseudomonas fluorescens strain AU5633 Contig_50, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACCGGCGATAGCCACAAATGCGCGTCCAGCGTACCCGGGCGATGATCGTGATCATGCTCGTCGGCGTCTTCGGCGTGGGAGTGGCTGTCTTCGGCGAAGC GGCGCAGTTTCATGCCCGGCAGATCCTGCACGGCGACGCTCGGCAGCGTTCGACCGTTCAGCACACGCGGCAGGAAACCTTCCATGTCCGGGCCGATCCA GTACAGCAGGTCCACCGATTGCACCTTGCGCACGTCGGACGGGCGTAGTGCGTAGTTATGCGGCGAAGCACCCGGCGGCAGCAACACTTCCGGGATGGCC ACACCGTCCTGGACCGCTGCAGCGATCAACTGCAACGGTTTGATGCTGGTGAGAACCTTGACCTCGGCCTGAGCCGAACCGATCAGCAGAAAACTGGCGA CAAAAGCCACAAAAACAGAAAAAAGTCGGGACACGATGACCACTCAAGGAGGCGAGAACGGGTAACATAATAACGTCTCTATCAAAACTCGTCGCCGCCC
|
|
DNA Sequence for Gene |
>AA066_RS26530
ATGCCTATTACACCGATTGCCAGCCGTCCCCACGACCACTCTCATTGCGTCCACAGCGCACTGACCGAGGCCGATACCTTGTGCGCCCAGAAAGGCCTGC GCCTGACTGCGCTGCGCCGGCGGGTGCTGGAACTGGTATGGCAGAGCCACAAGCCGCTGGGCGCCTACGACATTCTCGCGGTACTGAGCGAACAGGACGG CCGTCGCGCCGCGCCGCCAACCGTTTACCGCGCGCTGGATTTCCTGCTGGAAAACGGCCTGGTGCACCGCATCTCTTCACTCAACGCCTTCGTTGGTTGT GTGCATCCGGAGCATGCGCATCAGGGCCAGTTCCTGATCTGCCGCGAGTGCCACGCCGCGATCGAGCTGGAACAGAAAGCCATCAGCGACGCGATTATCC ACAGCGCCAAAGACGTCGGGTTCATTGTCGAAGCGCAGACCGTCGAAGTGGTCGGCCTGTGCGCCGGTTGCCAGGGGGCTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TGAGCAACCCGTTGATCCGTCTTCAGCACGTTGCTGTCACGTTTGCCGGGCAGACCGTGCTCGACAACATTGAGCTGAGCGTCGAGCCGGGGCAGATCGT CACCCTGATCGGCCCCAACGGCGCCGGCAAGACCACCCTCGTGCGCGCCGTACTCGGGCTGCTGAAGCCGGACAGCGGCAGCGTCTGGCGCAAGCCGAAA CTGCGCGTTGGCTACATGCCGCAAAAGCTGCACGTCGACCCGACCTTGCCGCTGTCGGTGCTGCGCTTCCTGCGCCTGGTGCCCGGTGTAGACCGCCCGC GCGCGTTGGCGGCGCTGAAAGAAGTCGGCGCCGAACACGTCATCGACAGCCCGGTGCAAAGCGTTTCCGGCGGTGAGATGCAACGTGTGTTGCTGGCCCG GGCGCTGCTGCGTGAACCAGAGTTGCTGGTGCTGGACGAGCCGGTGCAAGGCGTCGATGTCGCCGGGCAAGCCGAGCTCTACAGCCTGATCACCCGCCTG
|
|
Amino Acid Sequence |
>Fur family transcriptional regulator
MPITPIASRPHDHSHCVHSALTEADTLCAQKGLRLTALRRRVLELVWQSHKPLGAYDILAVLSEQDGRRAAPPTVYRALDFLLENGLVHRISSLNAFVGC VHPEHAHQGQFLICRECHAAIELEQKAISDAIIHSAKDVGFIVEAQTVEVVGLCAGCQGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|