Pseudomonas fluorescens AU5633, AA066_RS26115 (gyrB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU5633 Contig_50, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTCTTTGAACAAACCTTGAGCGAACTGGTTGAGCTTGAAGGTTTGACGCTCAGCTATTACCGAGGCTGGGACAAGGACCGGGAATTGAGTGCCGTACTGG CTGGCTCCGTGCAACGGGACCAGCAAATGGGTCATACCCAGGCCGGACCGCAACGGGCTGATTTGCGTCTTAGATTGGGCGCACACAATGCCGCGGACAT TTTGTCCCGGGGTCAGCAGAAACTGGTGGTCTGTGCCTTGCGAATTGCCCAGGGGCATCTGGTGAGCCAGGCCCGACGCGGCCAGTGTATTTATCTGGTG GATGACTTGCCGTCCGAGCTGGACGAGAGCCACCGCCGCGCGCTGTGCCGCTTGCTGGAAGACTTACGCTGCCAGGTTTTCATCACCTGTGTAGATCACG AATTATTGAGGGAAGGCTGGCAGACGGAAACGCCAGTCGCTCTGTTCCACGTGGAACAGGGCCGTATCACCCAGACCCACGACCATCGGGAGTGAAGGCA
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| DNA Sequence for Gene |
>AA066_RS26115
|gyrB
TTGAGCGAAGAAAATACGTACGACTCAACGAGCATTAAAGTGCTGAAAGGCCTGGATGCCGTACGCAAACGTCCCGGTATGTACATTGGTGACACCGACG ATGGCAGCGGTCTGCACCACATGGTGTTCGAGGTGGTCGACAACTCGATCGACGAAGCCCTCGCCGGCCACTGCGACGACATCAGCATCATCATCCACCC GGATGAGTCCATCACCGTTAAAGACAACGGCCGTGGCATCCCGGTAGACGTGCACAAAGAGGAAGGCGTTTCCGCTGCCGAGGTCATCATGACCGTCCTC CACGCTGGCGGTAAGTTCGACGACAACTCCTACAAGGTCTCCGGCGGTCTGCACGGTGTAGGTGTGTCGGTTGTGAACGCGCTGTCCGAAGAGCTGGTAC TGACCGTACGCCGCAGTGGCAAGATCTGGGAACAGACCTACGTCCACGGCGTGCCTCAGGCACCGATGGCGATCGTTGGCGACAGCGAAACCACCGGTAC CCAGATTCACTTCAAGGCTTCCAGCGAAACCTTCAAGAACATTCACTTCAGCTGGGACATCCTGGCCAAGCGCATTCGTGAACTGTCCTTCCTCAACTCC GGTGTCGGCATCGTCCTCAAGGATGAGCGCAGCGGCAAGGAAGAGCTGTTCAAGTACGAAGGCGGCCTGCGTGCGTTCGTTGAATACCTGAACACCAACA AGACTGCGGTCAACCAGGTGTTCCACTTCAACATCCAGCGTGAAGACGGCATCGGCGTGGAAATCGCCCTGCAATGGAACGACAGCTTCAACGAGAACCT GTTGTGCTTCACCAACAACATTCCGCAGCGCGACGGCGGTACTCACCTGGTGGGTTTCCGTTCCGCACTGACGCGTAACCTGAACAACTATATCGAGCAG GAAGGTCTGGCGAAGAAGCACAAAGTCGCCACCACCGGTGACGATGCCCGTGAAGGCCTGACCGCGATCATCTCGGTAAAAGTGCCGGATCCCAAGTTCA GCTCGCAGACCAAAGACAAGCTGGTGTCTTCCGAAGTGAAGACCGCGGTCGAGCAGGAGATGGGCAAGTACTTCTCCGACTTCCTGCTGGAAAACCCGAA CGAAGCCAAGCTGGTCGTCGGCAAGATGATCGACGCGGCGCGTGCCCGTGAAGCGGCGCGCAAGGCCCGTGAGATGACCCGCCGCAAAGGCGCGCTGGAC ATCGCCGGCCTGCCGGGCAAGCTCGCTGATTGCCAGGAAAAAGATCCTGCGCTGTCCGAACTGTACCTCGTGGAAGGTGACTCCGCGGGCGGCTCTGCCA AGCAGGGACGTAACCGCAAGACCCAGGCAATCCTGCCGCTGAAGGGCAAGATCCTCAACGTCGAGAAAGCACGCTTCGACAAGATGATCTCGTCCCAGGA AGTGGGCACGCTGATCACTGCACTCGGCTGTGGTATCGGTCGCGAAGAGTACAACATCGACAAGCTGCGCTATCACAACATCATCATCATGACCGATGCT GACGTCGACGGTTCGCACATCCGTACCCTGCTGCTGACTTTCTTCTTCCGTCAGTTGCCGGAGTTGATCGAGCGCGGTTACATCTACATCGCCCAGCCGC CGCTGTACAAGGTCAAGAAAGGCAAGCAAGAGCAATACATCAAAGACGACGACGCCATGGAAGAGTACATGACGCAGTCGGCCCTGGAAGATGCGAGCCT GCACCTGAACGAAGAGGCCCCGGGCATTTCCGGTGAGGCGCTCGAGCGTCTGGTGAACGACTTCCGCATGGTGATGAAGACCCTCAAGCGTCTGTCGCGC CTGTATCCGCAGGAGCTGACCGAGCACTTCATCTACCTGCCGGCCGTGAGCCTGGAAATGCTTGGCGACCACGCCAAGATGCAAGACTGGCTGGCTCAGT ACGAAGTGCGTCTGCGCACCGTCGAGAAGTCGGGCCTGGTCTACAAGGCCAGCCTGCGTGAAGACCGTGAACGTGGCGTGTGGCTGCCGGAGGTCGAGCT GATTTCCCACGGTCTGTCGAACTACGTCACCTTCAACCGCGACTTCTTCGGCAGCAACGACTACAAGACCGTCGTCACCCTCGGCGCTCAACTGAGCACC CTGCTCGACGAAGGCGCTTACATCCAGCGCGGCGAGCGCAAGAAAGCGGTCACCGAGTTCAAGGAAGCCCTCGACTGGCTGATGGCTGAAAGCACCAAGC GCCACACCATCCAGCGCTACAAAGGTCTGGGCGAAATGAACCCGGATCAATTGTGGGAAACCACCATGGACCCAAGCGTGCGCCGCATGCTGAAAGTCAC CATCGAAGACGCCATTGGCGCGGATCAGATCTTCAACACCCTGATGGGTGATGCGGTCGAACCTCGCCGTGACTTCATCGAGAGCAATGCGCTGGCGGTG TCCAACCTGGATTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCCGGTTGTAGGATCCCAGAAAAGCTGCTGTATTTCTCAATATGCTGCTTTCGCTGCACCAGGAAAAAGGCCAACCCACTCGGGTTGGCCTTTTTTATT GCCGCGCTGTTGCAATCGTCACGGATGCACTCTTCAACCTGTCACGCTCACTAGCTTGCGCCCAGCACTTGATGCCGGCATGCGTGATGCCGGAGTTCTC TAATGAGGACCGGTTGACTGGAGCTTTGTGCGAACTGCTCGAATGAGCTTGTTATTTAATTCCTTACACGTACAACTAATACTATCCGTCTTAGTTCTTA ATCAGATCGAGTAAGTTAGTGTGTTCTATTGAGGAGAACTTTAAATGTAAATTTGGAGCGGAAAGTTTGCGCCGCTTAATCTACTGGATTAAAATCGGGC GGTTAAAAATAAAGCGAGCCCCGTTTCCGGAAGCTCGCTTTATTCAAGCAGTTAAACGATTTTGTTCGAGCAAAATCTTAGGCTGCTTACACCAGTAACT
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| Amino Acid Sequence |
>DNA gyrase subunit B
MSEENTYDSTSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDISIIIHPDESITVKDNGRGIPVDVHKEEGVSAAEVIMTVL HAGGKFDDNSYKVSGGLHGVGVSVVNALSEELVLTVRRSGKIWEQTYVHGVPQAPMAIVGDSETTGTQIHFKASSETFKNIHFSWDILAKRIRELSFLNS GVGIVLKDERSGKEELFKYEGGLRAFVEYLNTNKTAVNQVFHFNIQREDGIGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNNYIEQ EGLAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSDFLLENPNEAKLVVGKMIDAARAREAARKAREMTRRKGALD IAGLPGKLADCQEKDPALSELYLVEGDSAGGSAKQGRNRKTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGREEYNIDKLRYHNIIIMTDA DVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKKGKQEQYIKDDDAMEEYMTQSALEDASLHLNEEAPGISGEALERLVNDFRMVMKTLKRLSR LYPQELTEHFIYLPAVSLEMLGDHAKMQDWLAQYEVRLRTVEKSGLVYKASLREDRERGVWLPEVELISHGLSNYVTFNRDFFGSNDYKTVVTLGAQLST LLDEGAYIQRGERKKAVTEFKEALDWLMAESTKRHTIQRYKGLGEMNPDQLWETTMDPSVRRMLKVTIEDAIGADQIFNTLMGDAVEPRRDFIESNALAV SNLDF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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