Pseudomonas fluorescens AU5633, AA066_RS25205
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens strain AU5633 Contig_50, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATGGCTGACCTGAACCTGTCTCTTGCAGTGTGCACAACTCCTGTCTTGAACGGCTTCTCTGTGGCGAGGGGATTCATCCCCGATCGGCTGCGCAGCAGTC GTAATCGAGCAAGCGCGGTTCTCCTGCAAGAACCGGTGATCAGGTCTTGGGGCTGCTTCGCAGCCCATCGGGAGCAAGCTCCCTCGACACAGGTTGCTCA TTTGCCACAGAAGGTGCGTGCCTCTCGGTGGTCTGGCTCAAGGCCCCGATGCAGAGCCTTCGAGACCACTCAAAGAATTAATTTCAGCGCCGCCCGCAAG GGTCGGCGCTTTGTGCTTTGTCTACCCCTGGAGACCCTCTGATGTCTGTTCGTCACTGGCACGCTGTCCTGCTGACCCTCGTCGTTCTATGCGGCCTTGG CGGCTGCAGCGGCAATTACAAATTCAACGACAACGACTATCGCCCGTTGGGTGATCCGCAAGCGGTCAATCGCGGCAAGTGACCGCAAGGAGCATCAAAC
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| DNA Sequence for Gene |
>AA066_RS25205
ATGGAATTGGTTTTCGAAATGCTGAACACCAAGCAGTTCGTGCCCACCGAGTTGTGCCAGAAGACCTTCAAACAGGCCGGCGGCGTGATCGGGCGGGGCG AGGACTGCGACTGGATCATTCCTGACCGCAAGCGTCATCTGTCCAATCACCACGCGATTGTCAGCTACCGCGAAGGCACGTTTTTCCTCACCGACACCAG CAGCAACGGGGTTCAGGACGGCGGCAGCGGCGCTCGCCTGCACAAGGGCGAACCGGTGCGCATCGAGCACGGCAGCACCTACGTGCTCGGCGACTTCGAG ATTCGTGCACGGCTGGTGCGTGACCCGGCGACCTTCGACGGTGAAGTCGGCCGTCCGCGTGCCGCCGGCAGCATCATTCCGGACGACGCCTTCCTCGACC TTGATCCGCTGAACGCGATCGAACAGCAAGAGCGCGTCTATTCGGAAATCGACGAACTGTTGGCGCCGACCGCCAAGCCCGAGGACTCCCGTCAGCGTGC CGACTATGCACGCATCGACATGGAAAGCCTGATGGTGCCCGAGCTGGTCGCCCCGGTTGAACCCGAGCCTGCTCCAGCCCCGAAAGCCGTCGAGCGTCAG AGCGAGGGTTTCTGGGAGCATTTCGGCGCGGCACTGGGCGTGGATCTCAAAGGCCTCGATCACGACGCCCGCGAAGCCCTGGCGCTGAACGCCGCGCGTC TGCTGCGCCAGAGCATCGGCGGTTTGCAGCAGAGCCTGCGCACCCGTTCGGAGCTGAAAAACGAACTGCGTCTGGCCCAGACCACCGTGCAAGGCACCAA CAAGAACCCGCTGAAGTTCGCCGTCGATCCGAGCGAAGCGCTGGAGATTCTGTTGCAGCCGCACAAGCCCGGGCACCTGCCGGCCGAGCAGGCGATTTCC CGCGCGTTCCGCGATCTGCAGGCGCATCAGGTGGCCTTGCTCACCGCCAGCCGCGCCGCCGTACGCGGCACCCTCGAGCACTTCTCGCCGGAGCAACTGA CCCTGCGTTTCGAGCGCGACAACAAGCCGTTGATCGCCACTTCGGGCGGACGCTGGAGAGCGTTCGGCCGTTACCACCAGGCCCTGCGTCAGGACGATGA CTGGAGCGAGCGTCTGCTGGCCCGCGATTTCGCCCAGGCCTACGAAGAACAGATCCGCCTGATTTCTACCCTACACACCGACCACCAAGGATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGCGCATGTCTCGCCGCTCGACCGCTTTTTTCAAGACGCTGACTGCGCTCACCGTGCTGGTGCTGCTCGCCGGTTGCTCGTCGCTGTCGCCGTACTCGAA AGTCACCAAGATCAATCTGAAGCTGACCGGCAGCGATCAGCTCAACCCGGACCTCAACGGCCGTCCTTCGCCGATCGTCGTGCGCCTGTTCGAACTCAAG CACCCGGTGACCTTCGAGAACGCTGATTTCTTCAGCCTCTACGAGCGCGCCAAGGAATCCCTCAACCCGGATCTGGTGGCCAGCGAAGAACTCGAACTGC GCCCGGGTGAAACCGTGGAAATGAAACTCAGCGTGGAGGAGGGCAGCCGCTACGTCGGCGTTCTCGCTGCGTACCGCGATCTGCCGGAAACCAAGTGGCG CTACACCGTGCAGGTCACCCCGCTGGAATTGACCGAGGCCGATCTGACCCTCGATCAGGCCGGGATCCGCAATACCCATGAAGCGCTCGCCAAGGCGGAT
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| Amino Acid Sequence |
>hypothetical protein
MELVFEMLNTKQFVPTELCQKTFKQAGGVIGRGEDCDWIIPDRKRHLSNHHAIVSYREGTFFLTDTSSNGVQDGGSGARLHKGEPVRIEHGSTYVLGDFE IRARLVRDPATFDGEVGRPRAAGSIIPDDAFLDLDPLNAIEQQERVYSEIDELLAPTAKPEDSRQRADYARIDMESLMVPELVAPVEPEPAPAPKAVERQ SEGFWEHFGAALGVDLKGLDHDAREALALNAARLLRQSIGGLQQSLRTRSELKNELRLAQTTVQGTNKNPLKFAVDPSEALEILLQPHKPGHLPAEQAIS RAFRDLQAHQVALLTASRAAVRGTLEHFSPEQLTLRFERDNKPLIATSGGRWRAFGRYHQALRQDDDWSERLLARDFAQAYEEQIRLISTLHTDHQG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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