Pseudomonas fluorescens AU5633, AA066_RS01465

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU5633 Contig_48, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCCGTGCCAGCTCGGCATCATCGAACTGGCGATCGTGCACAACGCGGCGGCGAACAGTGCCGCGACCATCACCGGTTTGCGCCCGACGCGGTCGGAGAT CGGCCCGGTGATCAGCAGACCGAAGGCCAGCATGCCGGTCGCCACCGACAGAATCAGGCTGCTCTGCGCCGCGTTGATTCCATACTCGTGGGACAGCAGC GGCATCATCGGCTGCACGCAATACAGCAAAGCGAAGGTCGCGAAGCCGCCACTGAACAGCGCGAGCACTGTGCGCATGAACATCGGCGTGCCTTTTTCGA TGTAGATCTCCTGCAGCTCGGCGATCACATCGTCCGCCGCGGCAGGCGGAACTTCATGGGCAAGAGGGGCGGCGGTTTTCACATCAGACCTCGGAGGGCA CGGCCAGGCAGGCAATGAAAAAATCATATAGCTGGCTAATGTTTCTATCCAATATATTGTTCGACCTGTTTGATAGCTTTAACGACCTAATGGGGTGTCC
DNA Sequence for Gene
>AA066_RS01465
ATGGAATTGCGTCATCTGCGCTACTTCATCGCCGTCGCCGAAGAACTGCATTTCGGCCGCGCCGCACAGGTGCAGGGGATCTCTCAGCCACCGCTGAGCC AGCAGATTCAGGCGCTGGAGCAAGAGGTCGGCGCGCGGTTGTTCGAACGCACCAATCGTCGGGTCGAGTTGAGCGAGGCCGGCCGATTGTTTCTGGAGGA GGCGCGGCTGGTGCTGGCGCAGGTCGACAAAGCGGCGGACGTCGCCCGGCGTGCGCAACTCGGTGAACTGGGCGAATTGAAAATTGGCTTCACCTCGTCA GCGCCGTTCAACTCGACCATTCCCCAAGCGATTTTTTCCTTTCGTCAGCGTTTCCCGGCAGTGCACCTGAACCTGCGGGAGATGAGCAGCACCATGGTCG CGGACGCGCTGGTGGATGAATCGATCGAAGTCGGCATCATGCGTCCGCTGGGTTTGCCGGATTCGCTGAGCGTGGTTGAGCTGATGCGCGAGCCCTTGGT GGCGGTGCTCAGCTCCAAGCATCCGCTGGCCCAAGGCAGTGAAGAGGGGCTGTTTCTCTCGGCGCTGGCGCTGGAGCCGTTCGTGTTCTTTCCGCGCAGC TACGGCAGCGGGCTGTATGCGCAACTGCTCAGTCTGGCCCGCGATGCCGGGTTCAGCCCGCATTTTGCCCAGGAGGCCGGTGAGGCGATGACCATCATCG GATTGGTCGCAGCGGGGCTTGGGGTTTCGGTATTGCCGGCGTCCTACCAGCGGATGCGCATCGACGGCGTGGTCTATCGACCGCTGCTCGATCCGGAGGC GGTGTCGGCGGTGTGGCTGGTTCAGCGCAAGGATCAGAAATCGCCGATGGCCAAGGCGTTTGTCGAACTGCTGACGCGTAAAGTCGAACCTTCAAACGCT TGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTGCTGCGCAATAAAATCGCGAGCAGGCTCGCTCCCCCAGGGCAACGCATTGCAAGGTGGGAGCGAGCCTGCTCGCGAAGACGCTCGCCCGAACACCGCA TATTTCAGGGCAACCGCACCAGATCCCCCTTCAACGCCACCCGCGTCACAAACACCCCGGCCCGACACTCATAGGTATTCAAATCCTTGCGCACATGCTG GTCGTAATAGCTGACGATATTGACCACCGCATTCGCCCCGACCCGCTTGGCGTCGGCCTGCAACTTGATCAGGTTCGACTGCAGCACCCACTCGCAGGAA TCGTGATCGCTCTTGTTGAAGCCGTTGGTGCGCAAATCACTGACCACATCCCGGCGCAACAACTGCTGCGTGCCCTGCGGCCCGTTGCCGATCAGATAAA ACTTCACACTGCCATCCAGCCGTCCGGCGCGAATCGCATCCGAAAGCACGGTTTCGAACGGCATGTACATCAGGTTGGTGGCGTGGCTGGCGCTGGGCAA
Amino Acid Sequence
>LysR family transcriptional regulator
MELRHLRYFIAVAEELHFGRAAQVQGISQPPLSQQIQALEQEVGARLFERTNRRVELSEAGRLFLEEARLVLAQVDKAADVARRAQLGELGELKIGFTSS APFNSTIPQAIFSFRQRFPAVHLNLREMSSTMVADALVDESIEVGIMRPLGLPDSLSVVELMREPLVAVLSSKHPLAQGSEEGLFLSALALEPFVFFPRS YGSGLYAQLLSLARDAGFSPHFAQEAGEAMTIIGLVAAGLGVSVLPASYQRMRIDGVVYRPLLDPEAVSAVWLVQRKDQKSPMAKAFVELLTRKVEPSNA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site