Pseudomonas fluorescens AU5633, AA066_RS01410

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU5633 Contig_48, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGCAGGAGCGCCTGACTGTCGCCGTGGTGGACATCGGCGCCACCATGACCACCCTCAGCGTCCTGCACAACGGCCGCATCATCTATACCCGCGAGCAAC TGTTCGGTGGCCGGCAACTGACCGAGGAAATCCAGCGCCGCTACGGTCTGACCGTCGAGCAGGCCGGACTGGCGAAAAAGCAGGGCGGTCTGCCGGATGA CTATGTCAGCGAGGTGTTGCAGCCATTCCGTGACGCCCTGGTGCAGCAGGTCTCGCGCTCATTGCAGTTCTTTTTCGCCTCCGGGCAGTACCATTCGGTC GATCATATTCTGCTGGCCGGCGGCACAGCCTCGGTACCGGGGCTGGATCGCCTGATCGAGCAGCGTCTGGGCACCCCGACCCAGGTCGCCAACCCGTTTT CCGACATGTCCTTGAGCAGCAAGGTCAACGCCGGGGCCCTGGCCAGTGACGCGCCGGCCCTGATGATCGCCTGCGGGCTCGCGCTCAGGAGTTTCGACTG
DNA Sequence for Gene
>AA066_RS01410
ATGGCGCGGATCAACCTTCTCCCCTGGCGTGAAGAGCGCCGCGAAGAGCGGCGCAAGCGCTTCCTGCTGATTCTCATCGGGGTCTTCGTCGGCTCGGTGG GCGCGGTATTTATCGCCGATCAGGTCTTCAGTACCGCCATCGAGCGGCAGGCCGCACGCAATGCCTACATCGGCAAACAGATTGCCGTGGTCGACGAACG AATCAAGCAGATCAGCGAACTCAAGGCGCGGCGCCAGCAACTGGTCGAGCGCATGCGCATCATCCAGGACTTGCAGGGCAACCGGCAGATCAGCGGGCGG ATCTTCGACCAACTGGCGCGCACGCTGCCGGACGGGGTGTATTTCACCAGCGTGAAACTGGCCGGCAAGACGCTGTCGATCAGCGGCGCGGCGGAGTCGA ACAATCGCGTTTCGGAGCTGATGCGCAATCTGGATGCCTCCGACTGGTTCGACGCGCCGAGTCTCAATGAAGTGAAAGCGACGACTGCCGGTCAGGTGGA CCAGGCCAACGTCTTTCAGCTGACCGTTCGTCAGACCCAGCCGGCCGTGACGGAGGGCGACAAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACCGTCCGAATGGCTGCAAAGTCTGCGCAATATCGACTTCAACGATCTGGACACCAGCAATATCGGCTCCTGGCCGGCCGCGGTGAAAAGCATCGCGGG AGTGTTCCTGGCGGTGCTGGTGCTGGCGCTTGGCTACAACTTCTTCATCAGCGACATGGAAAACCAGCTGGAAGCCAGGCGTCAGGAAGAAGACACCTTG AAAGAGCAATTCGCCAGCAAGGCGCGCATGGCCGCCAACCTGGAGCTGTACACCCAGCAGATGAAGGAGATGGAAAACACTTTTGGCGTGCTCCTGCGGC AGTTGCCCAGCGACACCGAAGTCCCGGGATTGCTCGAAGACATCACCCGCACCGGGCTGGGCAGCGGTCTCGAATTCGAAGAGATCAAACTGCTGCCGGA AGTGACTCAGCCGTTCTACATCGAGTTGCCGATCCAGATCACCGTCACCGGGGCTTACCACGACCTTGCGACGTTCGTCAGTGGGGTTGCCGGGTTGCCA
Amino Acid Sequence
>pilus assembly protein PilN
MARINLLPWREERREERRKRFLLILIGVFVGSVGAVFIADQVFSTAIERQAARNAYIGKQIAVVDERIKQISELKARRQQLVERMRIIQDLQGNRQISGR IFDQLARTLPDGVYFTSVKLAGKTLSISGAAESNNRVSELMRNLDASDWFDAPSLNEVKATTAGQVDQANVFQLTVRQTQPAVTEGDK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site