Strain | Pseudomonas fluorescens strain AU5633 Contig_48, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCGTGCTGCTCAACGCCAACCTTGAACAGCAACTGTGCAAAGGCATCGCCACGCTTAACCGCAAAACCCTCAGCGGCGAGCCACGGGGCAAGGACACAC CGTTCCAGGAACTCAAGGGCAACCTGACCTTGCGCAACGGCGTGGCCAGCAACCCGGACCTGAAAGTGCGCATCCCCGGCATGACCGTCAACGGCGACGG CGACATCGACCTGCGCGTGCTGGGCATGGATTACCGCGTCGGCATCATCGTCGAAGGCGATACCAGCGCCATGCCGGATCCGGCCTGTCAGGTCGGCGAG AAATTCGTCGGCATCGAGTGGCCGCTGCGCTGCCGTGGTCCGCTGGAGCTGGGCGCCAAGGCCTGCCGTGTGGATAACGAACGCCTCGGCCAGGTCGCGA CCAAAATGGCCGGAGACAAACTCAGCGAGAAGATCGATGAAAAACTCGGCGACAAGGTCAGCCCGGAATTGAAAAACGCATTGAAGGGGCTGTTCAAGCG
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DNA Sequence for Gene |
>AA066_RS00975
ATGAGAGCGGAGCAGTTTTCCACCGCGGTGCTGGAATGGTTCGACCGCCACGGCCGCCACGATTTGCCTTGGCAGCAGGACATCAACCCGTATCGGGTGT GGGTGTCGGAGATCATGTTGCAGCAGACCCAGGTCAGCACCGTGCTCAATTACTTCGACCGTTTCATGACCGCGCTGCCAACGGTGCAAGCGCTGGCCGA GGCGCCGGAGGACGAAGTGCTGCACCTGTGGACCGGGCTGGGTTACTACACCCGCGCGCGCAATTTGCAGAAGACCGCGAAGATCGTCGTCAGCCAGTAC GGCGGCGAATTTCCGCGGGACGTCGAAAAGCTGACAGATCTGCCGGGCATCGGCCTGTCCACCGCCGGCGCCATCGCCAGCATCAGCATGGGCCTGCGCG CGCCGATCCTCGATGGCAACGTCAAACGCGTTCTGGCGCGTTTTACTGCGCAAGAGGGTTACCCGGGTGAACCGAAGGTTGCCAGACAGCTGTGGGCCAA CGCAGAGCGTTTCACGCCACATGATCGAGTCAACGCCTACACCCAGGCGATGATGGATCTCGGCGCCACGCTGTGCACCCGCAGCAAACCCAGCTGCCTG CTGTGTCCGCTGGAAAAGGGCTGCGAGGCGCACATGCTCGGCCTGGAAACGCGCTACCCGATCCCCAAACCGCGCAAAGCGATACCGCAAAAACGTACGC TGATGCCGATGCTCGCCAATGGCGACGGCGCGATTCTGCTTTATCGCCGTCCCTCCAGCGGTCTGTGGGGCGGTTTGTGGAGCCTGCCGGAACTCGACGA TCTCGACGACCTGCAACATCTGGCCGATCAGCACTCGCTGTCCATGGGCGAACAGCAGGCGCTGCCAAGCCTCGTTCACACCTTCAGTCATTTCCAGCTG TCCATCGAACCCTGGCTGGTTCAGGTACAGGAGGCCACCCATCACGTGGCCGAGGCCGACTGGCTCTGGTATAACCTCGCCACCCCGCCGCGCCTGGGCC TTGCTGCCCCGGTCAAAACCTTGCTCGAGCGCGCGGCCGCCGTATTGAACGCAGGAGAGTCGTCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCCGCACCATCATGTGCCGCAAGTACAAAGAAGAATTGCCCGCGCTGGAACGCGCTCCCTTCCCGGGCGCCAAAGGTCAGGACATTCTTGACCACGTCTC GGCCAAGGCCTGGGCTGACTGGCAGAAACACCAGACCCTGCTGATCAACGAAAAGCGTCTGAACATGATGAACGCCGAAGACCGCAAATACCTTCAGGGC GAAATGGACAAGTACTTCTCCGGCGAGGATTACGCCAAGGCCGAAGGCTACGTTCCGCCTGCTGAATAAACCCGCAAAATCCGGGGGCGAATCGTAAGCG ACGGAATTAATTTAAGAAATTTTAAAAAAGTCGTTGACGTAAATCCGAAAAACCCTTTTAATGCGCCCCGTTGCCCAGATAGCTCAGTCGGTAGAGCAGG GGATTGAAAATCCCCGTGTCGGCGGTTCGATTCCGTCTCTGGGCACCAAATACCGAAAACCCTGAATCGCAAGATTCAGGGTTTTTTTATGCCTGCGATT
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Amino Acid Sequence |
>adenine glycosylase
MRAEQFSTAVLEWFDRHGRHDLPWQQDINPYRVWVSEIMLQQTQVSTVLNYFDRFMTALPTVQALAEAPEDEVLHLWTGLGYYTRARNLQKTAKIVVSQY GGEFPRDVEKLTDLPGIGLSTAGAIASISMGLRAPILDGNVKRVLARFTAQEGYPGEPKVARQLWANAERFTPHDRVNAYTQAMMDLGATLCTRSKPSCL LCPLEKGCEAHMLGLETRYPIPKPRKAIPQKRTLMPMLANGDGAILLYRRPSSGLWGGLWSLPELDDLDDLQHLADQHSLSMGEQQALPSLVHTFSHFQL SIEPWLVQVQEATHHVAEADWLWYNLATPPRLGLAAPVKTLLERAAAVLNAGESS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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