Pseudomonas fluorescens AU5633, AA066_RS00540

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU5633 Contig_48, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAAACCCCAGGCGCAGCCGTTTGACGCCCTGCCGCACCGTCGGCTCGATCGCCACTTCGCCGTTGCGCATGCGCCGGCTGATGGTTTCCGGCCCGGCCCA GAATGTCGAGTCCAGCCCGCCCTCGCGGGCCAGTGCATTGACCACGCCACCCTGAGCGGTCTCCGCCAGCAGGCGCAAGGCGCGGTAGAGATTGGACTTG CCGCTGCCGTTGGGGCCGGTGATCAGGTTCAGCCGGCCCAGCGGAATCACCAGTTTGTTGATCGAGCGGTAATTGGCCACCGCGAGGGTCTTGAGCATGA AAATCCTTCTCTTGAGGCGACCATTGTAGGAGCTGCCGCAGGCTGCGATCTTTTGATCTTGCTTTTGTAAAGTCAAAAGATCGCAGCCTGCGGCAGCTCC TACAGGGGAAATATAGAGATCGCGCGAGCGAACGTTGAACCCTGTTCTAAGCTCACAGTCGTATCGTCACTTGCACGTTCGTACACAGGAAGGAGTCTGC
DNA Sequence for Gene
>AA066_RS00540
ATGGCGAGTCCCGGATTGAAAACAGTTGTCGTGCTGAGCCTGCTCACGTTGTTGACCGCTTGCGGCAAGAAAGAAGCCCCGGCGGAGTACCTGCCACGGG TCTTTGTGCAAGAGGTCAAACCCGCCGATTACGCGGCTGCCGTGACCCTGACCGGCGATGTGCAGGCCCGGGTGCAGACCGAACTGTCGTTCCGGGTCGG TGGCAAGATCATCCAGCGCATGGTCGATGTCGGCGACCGGGTCAGCGCCAGGCAAGTGCTGGCCAAACTCGATCCCAAGGATTTGCAGACCAACGTCGAT TCCGCTCAGGCCCAGGTCATCGCCGAGCAGGCACGGGTCAAGCAGAGCGCCGCAGCGTTCGTGCGTCAGCAGAAACTGTTGCCCAAGGGTTACACCAGCC AGAGCGAATTCGACTCCGCCCAAGCCGCCTTGCGCAGCAGCCAGAGCGCCTTGAGCGCGGCACAGGCGCAACTGGCCAATGCCAAGGATCAATTGAGCTA CACCGCGCTGATCGCCGATGCCCCGGGGATTATCACCGAGCGCCAGGCCGAGGTCGGCCAAGTGGTCCAGGCCACCGCGCCGATTTTCAAACTGGCCCGC GATGGCGATCGCGACGCGGTGTTCAACGTCTACGAATCGCTGCTGGCCGAACGCCCTGACGATCGCTCGATTGTCGTCAGCCTGCTCGATAATCCCGCGA TCAAGACCACCGGCACGGTGCGCGAAATCACCCCGGCGGTGTCGGCGCAGTCCGGCACGGTGCAAGTCAAAGTCACCCTCGACAGCCTGCCGCAGGGCAT GCAGCTCGGCTCGGTGGTCAGCGCCACGGCCAAGGGCAGCGGCAAGTCGGCGGTGGAATTGCCATGGTCGGCGCTGACCAAAAACATCAGCGAGCCGGCC GTATGGATGGTTGACGACAAGGGCGAGGCGCAGTTGCACAACGTCACTGTCAGCCGCTACCTGATCGGCAAGGTGATCATCAGCGACGGTCTCCAAGGCG GGGAAAAAGTCATTGTCGCGGGTGGGCAGTTGTTGCATCCGGGCATGAAAGTCGAGATCGCCGAAAACACCTACAAGGATCTGCAACCGGGAGCACAGCC ATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGCGTCTGGGGCTGTTATCCATCAGTGTGTTGCTGGCCGCCTGCTCGAAACGCGAGCCGCCTCCGGAGCCGGTACGACCCGTGCTGTCGATCAAGGTACA GGCGCTGAACGAGGAAACCCTCGGGCGTTTCGCCGGCAGCATTCAGGCGCGTTACGAGAGCAACACCGGTTTCCGCGTCGGTGGACGTATTGCCAGCCGT AACGTCGATGTCGGTACCGAGGTGCAAAAGGGTACGTTGCTCGCCACGCTCGACCCCTCCGATCAACAGAACCAGTTGCGTTCGGCCCAAGGCGATCTGG CCAAGGTGCAGGCGCAACTGATCAACGCCCAGGCCAACGCCCGGCGTCAGCAGGCGCTGTTTGATCGTGGGGTGGGCGCGCAGGCACAACTGGACATCGC CATCACCGATCTGAAAACCACCCAGGCCTCGCTCGATCAGGCACGGGCGGCGGTCGATCAGAGCAAGGATCAGCTCGGCTACACCGAACTGCGCGCCGAC
Amino Acid Sequence
>RND transporter
MASPGLKTVVVLSLLTLLTACGKKEAPAEYLPRVFVQEVKPADYAAAVTLTGDVQARVQTELSFRVGGKIIQRMVDVGDRVSARQVLAKLDPKDLQTNVD SAQAQVIAEQARVKQSAAAFVRQQKLLPKGYTSQSEFDSAQAALRSSQSALSAAQAQLANAKDQLSYTALIADAPGIITERQAEVGQVVQATAPIFKLAR DGDRDAVFNVYESLLAERPDDRSIVVSLLDNPAIKTTGTVREITPAVSAQSGTVQVKVTLDSLPQGMQLGSVVSATAKGSGKSAVELPWSALTKNISEPA VWMVDDKGEAQLHNVTVSRYLIGKVIISDGLQGGEKVIVAGGQLLHPGMKVEIAENTYKDLQPGAQP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site