Strain | Pseudomonas fluorescens strain AU5633 Contig_43, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGAACTGGGCGACAGCGGCAACGCGCCGGCCCGCCCGCATTTTGCCGACTGGATGGTGCGTGAAGGTTTCGTAAAGGATCGCGCCGAGGCATTCCGCAAA TGGCTCGGCGCCGGCAAGCTGGGTGACGTCAAGCAGCACTGGCCGACGCTGGAAGACACCGTCGGCACCCTGCGCGCCGCCGGGGCGTGGGTCAGTCTGG CGCATCCGTGGCACTACGATTTCACCCGCAGCAAGCGCCGAAAGCTGATTGCCGACTATATTCAAGCGGGCGGGCATGCAATCGAAGTGGTCAATGGCCA TCAGCCCGCAGAACAGGTCGGCAGCCTGGCGATCCTTGCCCGTGAGTTCGGTCTGCTGGTCAGTGCCGGCAGTGATTTTCATGGCCCTGGTGGCTGGTCC GAGATTGGCCAGTACCGGCCGGTTCCCGAGGACCTTCCACCCCTGTGGGGTCGGTTCAAACATGACACAGTTATCGCCGCCGTCTGAACAGGTAGAGAAT
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DNA Sequence for Gene |
>AA066_RS07145
GTGAGTCAATTTTTCCAGATCCATCCGGAAAACCCGCAAGCGCGCCTGATCAAACAGGCGGTCGAGATCATCCGCAAGGGCGGGGTGGTGATTTATCCCA CGGACTCTTCCTACGCCATCGGTTGCCAGATCGGCGACAAGACCGCAATCGAGCGCGTGCGCCGTCTGCGTCAGCTCGACGAAAAGCACAACTTTGCGCT GATCTGCAGCGATCTGTCGCAACTGGGCAACTATGCCAAGATCGACACCGGCACCTTCCGCATTCTCAAGGCGCATCTGCCGGGGCCTTACACCTTTATC CTCAATGCCACCCGCGAAGTGCCGCGTTTGCTGCTGCATCCGAAGAAACGCACCATCGGCCTGCGGGTGCCGAGCCATCCGATTGCCTTGGCGTTGCTGG CCGAACTCGGCGAGCCGCTGATGAGTGTGACCCTGATCATGCCCGGCGATGAAGATCCGCTGAGCGATCCGTACGAAATGCGTCAATTGCTGGAACACCA GGTGGATCTGATCATCGACGGCGGTTTCGGCGGGATCAAGGCGTCCACCGTGATCGACCTGACCGGCGACGACCCGGAAGTGATCCGCGTCGGTTGCGGC GACCCCGCGCCGTTCATGGTCGAGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATGTCCGCAGTGGAAACCGTTGTCGATCCCCAAGCCGGCGCCCAGCAGGAACTGCCGTTTGCCATGGTCTATGGCCAGGCGGTCACGGAAATGCCGCTGG ACCTGTACATCCCGCCGGATGCGCTGGAAGTGTTTCTCGAAGCCTTCGAAGGCCCGCTCGACCTGCTGCTGTACCTGATCCGCAAACAGAACATCAACAT TCTCGACATCCCGGTGGCGGAAATCACCCGTCAGTACATGGGCTATGTCGAGTTGATGCAGTCGGTGCGCCTGGAACTGGCCGCCGAGTACCTGGTGATG GCCGCGATGCTGGCCGAAATCAAATCGCGGATGCTCCTGCCGCGGGCCGAAACCGTCGAAGACGAAGAGGACGACCCGCGCGCCGAACTGATCCGCCGCC TGCAGGAATACGAGCGCTTCAAGGCCGCCGCCGAAGGCATCGACGGCCTGAGCCGGGTCGGACGCGATGTTGTGGTGCCCAAGCTCGACGCCCCGGAAGC
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Amino Acid Sequence |
>translation factor Sua5
MSQFFQIHPENPQARLIKQAVEIIRKGGVVIYPTDSSYAIGCQIGDKTAIERVRRLRQLDEKHNFALICSDLSQLGNYAKIDTGTFRILKAHLPGPYTFI LNATREVPRLLLHPKKRTIGLRVPSHPIALALLAELGEPLMSVTLIMPGDEDPLSDPYEMRQLLEHQVDLIIDGGFGGIKASTVIDLTGDDPEVIRVGCG DPAPFMVEA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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